Gordonia polyisoprenivorans: GPOL_c07340
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Entry
GPOL_c07340 CDS
T01719
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gpo
Gordonia polyisoprenivorans
Pathway
gpo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GPOL_c07340 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpo03400
]
GPOL_c07340 (nth)
Enzymes [BR:
gpo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GPOL_c07340 (nth)
DNA repair and recombination proteins [BR:
gpo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GPOL_c07340 (nth)
Prokaryotic type
GPOL_c07340 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AFA71802
UniProt:
H6MWZ6
LinkDB
All DBs
Position
880910..881731
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AA seq
273 aa
AA seq
DB search
MSARKTAASKAQPKAASTTQPRSGTGGSGTKKAETHLGLVRRARRMNRTLKVAFPHVYCE
LDFTTPLELSVATILSAQCTDVRVNQTTPAVFARYRTALDYAQADRTELEELIRPTGFYR
NKTNSLIGLGQALVERFDGEVPHTLPELVSLPGFGRKTANVVLGNAFGVPGITVDTHFGR
LVRRWEWTEETDPVKVEHAVGELIERKEWTDLSHRVIFHGRRVCHARKPACGVCILAKDC
PSVGTGPMDKTAAAALVKGPETDHLLALAGITS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcgcaagacggctgcatcgaaagcccagccgaaggctgcatcgacaacccag
ccgaggtcggggacgggtggttcgggcaccaagaaggccgaaacccatctcgggttggtt
cgtcgcgcccgccggatgaatcgcacgctgaaggtggcttttccgcacgtgtactgcgag
ctcgatttcaccaccccgctggaattgtcggtggccaccatcttgtcggcgcaatgcacc
gacgtccgcgtgaaccagaccaccccggcggtgttcgcccgctaccgcaccgcgttggac
tacgcgcaggccgaccgcaccgaactcgaggaattgatccgccccaccggtttctaccgg
aacaagaccaactcgctcatcgggctcggtcaggcactcgtggagcggttcgacggcgag
gtgccgcataccctgcccgaactggtgtcgctgcccggattcggccgtaagaccgcgaat
gtggtgttgggcaatgctttcggggttcccggaatcaccgtcgacacccacttcggtcgt
ctggtccggcgctgggagtggaccgaggagaccgacccggtcaaggtcgagcacgccgtc
ggcgaactcatcgagcgcaaggagtggaccgatctgtcccaccgggtgatcttccatggc
cgacgcgtctgccacgcgcgcaaaccggcgtgcggggtgtgcatcctggccaaggactgc
ccgtcggtcggaaccgggccgatggacaagacggcggccgcggccctggtgaagggcccc
gagaccgatcacctactggcgttggcggggatcacttcgtga
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