KEGG   PATHWAY: gra00195
Entry
gra00195                    Pathway                                
Name
Photosynthesis - Gossypium raimondii
Description
Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
Class
Metabolism; Energy metabolism
Pathway map
gra00195  Photosynthesis
gra00195

Module
gra_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:gra00195]
gra_M00161  Photosystem II [PATH:gra00195]
gra_M00163  Photosystem I [PATH:gra00195]
Organism
Gossypium raimondii [GN:gra]
Gene
105761243  [KO:K02693]
105762610  [KO:K02692]
105762845  [KO:K02639]
105763927  [KO:K02113]
105764192  [KO:K08902]
105765013  [KO:K02639]
105766236  [KO:K03541]
105766728  [KO:K02721]
105767924  [KO:K02695]
105768233  [KO:K08901]
105768631  [KO:K08905]
105768913  [KO:K02641] [EC:1.18.1.2]
105769473  [KO:K02641] [EC:1.18.1.2]
105769548  [KO:K02638]
105769912  [KO:K02694]
105770029  [KO:K02639]
105770748  [KO:K03542]
105770781  [KO:K14332]
105771045  [KO:K02717]
105772957  [KO:K02115]
105773517  [KO:K08901]
105773851  [KO:K02694]
105774035  [KO:K08902]
105774852  [KO:K08906]
105775584  [KO:K03541]
105775837  [KO:K02113]
105778097  [KO:K08901]
105778219  [KO:K02717]
105779830  [KO:K02701]
105780389  [KO:K02717]
105780772  [KO:K02115]
105782642  [KO:K02639]
105782665  [KO:K08901]
105783695  [KO:K02639]
105783997  [KO:K08905]
105784237  [KO:K08901]
105784690  [KO:K02699]
105785844  [KO:K02723]
105786161  [KO:K03542]
105788079  [KO:K02701]
105790456  [KO:K02699]
105790490  [KO:K02693]
105790717  [KO:K02692]
105792286  [KO:K02721]
105792848  [KO:K14332]
105794918  [KO:K02636] [EC:7.1.1.6]
105795285  [KO:K02639]
105795286  [KO:K02639]
105795528  [KO:K02698]
105796640  [KO:K02692]
105798509  [KO:K08903]
105800521  [KO:K02639]
105803163  [KO:K02721]
105803259  [KO:K02693]
105803703  [KO:K02641] [EC:1.18.1.2]
105803856  [KO:K02716]
11538475  atpF; ATP synthase CF0 B subunit [KO:K02109]
11538476  atpH; ATP synthase CF0 C subunit [KO:K02110]
11538478  petN; cytochrome b6/f complex subunit VIII [KO:K03689]
11538479  psbM; photosystem II protein M [KO:K02714]
11538483  psbD; photosystem II protein D2 [KO:K02706] [EC:1.10.3.9]
11538485  psbZ; photosystem II protein Z [KO:K02724]
11538486  psaA; photosystem I P700 apoprotein A1 [KO:K02689] [EC:1.97.1.12]
11538495  psaI; photosystem I subunit VIII [KO:K02696]
11538497  psbF; photosystem II protein VI [KO:K02708]
11538498  psbE; photosystem II protein V [KO:K02707]
11538500  petG; cytochrome b6/f complex subunit V [KO:K02640]
11538503  psaJ; photosystem I subunit IX [KO:K02697]
11538510  psbH; photosystem II protein H [KO:K02709]
11538511  petB; cytochrome b6 [KO:K02635]
11538512  petD; cytochrome b6/f complex subunit IV [KO:K02637]
11538546  atpI; ATP synthase CF0 A subunit [KO:K02108]
11538548  atpA; ATP synthase CF1 alpha subunit [KO:K02111] [EC:7.1.2.2 7.2.2.1]
11538550  psbC; photosystem II 44 kDa protein [KO:K02705]
11538554  psaB; photosystem I P700 apoprotein A2 [KO:K02690] [EC:1.97.1.12]
11538559  atpE; ATP synthase CF1 epsilon subunit [KO:K02114]
11538560  psbB; photosystem II 47 kDa protein [KO:K02704]
11538561  psbT; photosystem II protein T [KO:K02718]
11538563  psbK; photosystem II protein K [KO:K02712]
11538576  psbI; photosystem II protein I [KO:K02710]
11538578  psaC; photosystem I subunit VII [KO:K02691] [EC:1.97.1.12]
11538581  psbA; photosystem II protein D1 [KO:K02703] [EC:1.10.3.9]
11538592  petA; cytochrome f [KO:K02634]
11538594  atpB; ATP synthase CF1 beta subunit [KO:K02112] [EC:7.1.2.2 7.2.2.1]
11538599  psbJ; photosystem II protein J [KO:K02711]
11538600  psbL; photosystem II protein L [KO:K02713]
128031876  [KO:K02639]
128035949  [KO:K02111] [EC:7.1.2.2 7.2.2.1]
128035952  [KO:K02703] [EC:1.10.3.9]
128035955  [KO:K02108]
128035962  [KO:K02689] [EC:1.97.1.12]
128036803  [KO:K02108]
128037727  [KO:K02704]
128037730  [KO:K02635]
128038522  [KO:K02112] [EC:7.1.2.2 7.2.2.1]
128038531  [KO:K02690] [EC:1.97.1.12]
128038755  [KO:K02634]
128038780  [KO:K02108]
128038822  [KO:K02705]
128038824  [KO:K02690] [EC:1.97.1.12]
128038832  [KO:K02112] [EC:7.1.2.2 7.2.2.1]
128038864  [KO:K02635]
27429611  atp8; ATPase subunit 8 [KO:K02109]
Compound
C00001  H2O
C00002  ATP
C00005  NADPH
C00006  NADP+
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00034  Manganese
C00080  H+
C02061  Plastoquinone
C16693  Plastoquinol
Reference
PMID:14764885
  Authors
Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S.
  Title
Architecture of the photosynthetic oxygen-evolving center.
  Journal
Science 303:1831-8 (2004)
DOI:10.1126/science.1093087
Reference
PMID:12518057
  Authors
Kamiya N, Shen JR.
  Title
Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.
  Journal
Proc Natl Acad Sci U S A 100:98-103 (2003)
DOI:10.1073/pnas.0135651100
Reference
PMID:11217865
  Authors
Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P.
  Title
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution.
  Journal
Nature 409:739-743 (2001)
DOI:10.1038/35055589
Reference
PMID:11418848
  Authors
Jordan P, Fromme P, Witt HT, Klukas O, Saenger W, Krauss N.
  Title
Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.
  Journal
Nature 411:909-917 (2001)
DOI:10.1038/35082000
Reference
PMID:11369223
  Authors
Jones MR, Fyfe PK.
  Title
Photosynthesis: new light on biological oxygen production.
  Journal
Curr Biol 17:R318-R321 (2001)
DOI:10.1016/S0960-9822(01)00174-9
Reference
PMID:11914373
  Authors
Shen G, Zhao J, Reimer SK, Antonkine ML, Cai Q, Weiland SM, Golbeck JH, Bryant DA.
  Title
Assembly of photosystem I. I. Inactivation of the rubA gene encoding a membrane-associated rubredoxin in the cyanobacterium Synechococcus sp. PCC 7002 causes a loss of photosystem I activity.
  Journal
J Biol Chem 277:20343-54 (2002)
DOI:10.1074/jbc.M201103200
Related
pathway
gra00196  Photosynthesis - antenna proteins
gra00710  Carbon fixation by Calvin cycle
KO pathway
ko00195   

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