Gossypium raimondii: 105761826
Help
Entry
105761826 CDS
T04129
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105761826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105761826
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105761826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_25
AAA
AAA_29
Arf
AAA_15
AAA_23
AAA_30
ORC-CDC6-like
Zeta_toxin
AAA_7
nSTAND3
AAA_28
Motif
Other DBs
NCBI-GeneID:
105761826
NCBI-ProteinID:
XP_012435220
UniProt:
A0A0D2SX08
LinkDB
All DBs
Position
11:complement(176533..178906)
Genome browser
AA seq
329 aa
AA seq
DB search
MAVMESSKPTVEINGLSFTYPGIDGHPPPGSKPLIDGFSLTLNAGDRCLLVGSNGAGKTT
ILKILGGKHMVEPHMVRVLGRSAFHDTVLASSGDLCYLGGEWRRDVAFAGFEVPIQMDIS
AEKMIFGVAGIDPKRRYELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEI
TVDLDVLARADLLNFLRKECEERGATIIYATHIFDGLEKWPSHIVYVAHGKLQLAMPMDK
VKEISNSSLMRTVESWLRKERDEERKKRKERKSQGLPELENQTEGSRVTGDPARAAVRSL
NNGWAAGRLNSTVAGEENFVFSSNRVLRQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgatggagagttcgaaaccaacggtggagatcaacggattgagcttcacgtat
cctggaatcgacggtcatccaccgccgggatccaagcctcttatcgacggtttctctctc
accctaaacgctggcgatcggtgtctcctcgtcggatccaatggcgccgggaaaacaacg
atattgaagattctgggagggaagcatatggtggagccgcacatggttcgagtattggga
agatccgctttccacgacaccgttttggcttcctccggtgatctttgttatcttggagga
gagtggagacgtgatgttgcttttgcaggattcgaggttccaattcaaatggacatttca
gctgagaaaatgattttcggagttgcaggtattgatcccaaaagaagatatgaactaatt
aaggtattagatattgatctctcgtggaggatgcacaaggtatcggatggtcaaagaaga
cgtgtccaaatttgtatgggtctccttaagccattcaaggttcttctacttgatgagata
acggtcgaccttgatgtgctagcaagagctgaccttctgaatttccttaggaaggaatgc
gaagagcgaggtgccacaattatctatgcaacacatatattcgacggtcttgagaagtgg
ccatcacatattgtttacgttgctcatgggaaattgcaattagcaatgccgatggataag
gttaaggagattagcaattcgtcgctaatgagaacagtggagagctggttgaggaaggaa
cgagacgaagaaagaaagaaaagaaaagagcggaaatcacagggtctcccggaattggaa
aaccaaaccgagggaagccgtgtgacaggggatcctgcccgagccgccgttcgttcacta
aacaatggttgggctgccggacggttgaactcgacggttgccggtgaagaaaacttcgtg
ttcagctcaaacagagttttaaggcaataa
DBGET
integrated database retrieval system
