Gossypium raimondii: 105775103
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Entry
105775103 CDS
T04129
Name
(RefSeq) alpha-farnesene synthase
KO
K14173
alpha-farnesene synthase [EC:
4.2.3.46
]
Organism
gra
Gossypium raimondii
Pathway
gra00909
Sesquiterpenoid and triterpenoid biosynthesis
gra01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
105775103
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.46 alpha-farnesene synthase
105775103
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
IL15
Motif
Other DBs
NCBI-GeneID:
105775103
NCBI-ProteinID:
XP_012453092
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Position
10:1290125..1293684
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AA seq
572 aa
AA seq
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MECSRQVQVVDDKQQVVSCHLKSAAFDEIQQRRSANYKANIWQYDFLQSLPTIYNGVEYT
LRVENLKENVKDMFVEAKDQLAKLELIDIIRKLGLGDLFAEETHKALQTVVSSMKNNKNG
EEEELYMTALRFKLLRLHGYDVSQDVFNAVSITKCSDIKGLLELFEASYLAFEGETILDE
AKAFSMEALRNVYPTLDLNLAKEVAHALELPMHWRVQWFDVKWRITMYETYNKNIDKGFL
ELAKLNFNTVQAILQKDLREISRWWRNLRIMEGLNFTRDRLAESFLCSVGLTYEPQYSCF
RKCLTKITTMILIIDDVYDVYGSIEELEQFTEAVDRWDSSKTQDLPECMKTCFQALYDIT
NEIAYDIQELNGWQVQALLHLRKAWAGFCKALFVEAKWYNKGYSPSLEEYLSNALISSGA
IVISIHTMLSVGSTDEKIINLLGKDEDLAYNISIITRLHNDLGTSMAEKERGDAPSSIHC
YAREMNVSEKEAEEHIKNMINNTWKKINGQCLNNQSHNLLPCSFVKVTTNVARMVQCLYQ
FGDGFGIQDRETRNHIISLLIEPINLDKTAKD
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtagtaggcaagtgcaggtagtagatgacaagcagcaagttgtaagttgccac
ttgaaatcagcagcctttgatgagatccaacaaagacgatctgcaaattataaggctaac
atttggcaatatgatttcttacaatcccttccaaccatatataatggtgtggaatacacg
ttaagggttgagaatttgaaagagaatgtgaaggacatgtttgtggaagcaaaggaccaa
ttagccaaattggagctgattgacattatcagaaaactaggccttggggacctttttgca
gaggaaacgcataaagctttacaaactgtagtatcttccatgaaaaacaacaaaaatggt
gaagaagaagaactctatatgactgctttacgcttcaagctccttaggctgcatggctac
gacgtttcccaagatgtattcaatgcagtctcaataaccaaatgcagtgacatcaaggga
ttgcttgaactctttgaagcttcgtatctagcttttgaaggagaaaccattttggatgaa
gctaaagctttttcaatggaagctcttaggaatgtttatcctacactggatttgaactta
gctaaggaagttgctcatgctttggaacttccaatgcattggagagtacagtggtttgat
gttaaatggcgcatcaccatgtatgaaacatacaataaaaacatagacaaaggttttctt
gaattggctaaacttaactttaacacagtccaagccatacttcagaaagatctaagggaa
atttccaggtggtggaggaacctaaggataatggagggtttaaactttacaagggatcga
ttggctgaaagtttcttatgctcagttggacttacttacgagcctcaatacagttgtttc
agaaaatgtctcactaagattaccaccatgatattaatcatagatgatgtttatgatgtt
tatggttccattgaagagctagagcaattcaccgaggctgttgacaggtgggattcaagc
aaaactcaggatctacccgagtgcatgaaaacatgctttcaagctctatacgatattacc
aatgaaattgcttatgacatacaagaactcaatggttggcaagtccaagcactacttcat
ctgaggaaagcgtgggcaggattttgtaaagcactatttgtagaagcaaaatggtataat
aaaggatatagtccttcccttgaagaatatttaagcaatgcattaatttcatcaggagcc
attgtgatttccattcacacaatgctctcagtggggagtactgatgaaaaaattatcaat
ctattgggaaaagatgaagatcttgcttacaacatcagcatcataacacgacttcacaac
gatttaggaacttcaatggcggagaaagagagaggggatgcaccatcatcaatccattgt
tacgcgcgagaaatgaatgtttcagagaaagaagctgaagaacatatcaagaacatgatc
aacaatacatggaagaaaataaatgggcaatgtttgaataatcaatcacataatttgctc
ccatgttcttttgttaaggttactactaacgttgcacgtatggtgcaatgtctgtatcag
tttggtgatgggttcggcattcaagaccgagagactcgaaaccatatcatttctctttta
attgagccaatcaatttggataagactgcaaaggattaa
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