Gossypium raimondii: 105779416
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Entry
105779416 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105779416
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00020
Citrate cycle (TCA cycle)
gra00785
Lipoic acid metabolism
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
gra01200
Carbon metabolism
gra01210
2-Oxocarboxylic acid metabolism
Module
gra_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gra_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
105779416
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
105779416
Enzymes [BR:
gra01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
105779416
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
105779416
NCBI-ProteinID:
XP_012458608
UniProt:
A0A0D2RZ71
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Position
4:40362168..40383565
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AA seq
1023 aa
AA seq
DB search
MGWLRAGSSVAKLAIRRTLSQGGSYAARSRIVPSQSRYFHTTVFKSKAQTAPVPRPVPLS
KLTDSFLDGTSSVYLEELQRAWEADPDSVDESWDNFFRNFVGQAATSPGISGQTIQESMR
LLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPAFYGFTEADLDREFFLGVWRMAGFLS
ENRPVQTLRSILTRLEQAYCGSIGFEYMHIAERDKCNWLRDKIETPTPMQYNRQRREVIL
DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRL
NVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV
ANPSHLEAVDPVVVGKTRAKQYYSNDEDRTKNMAILIHGDGSFAGQGVVYETLHLSALPN
YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALNAPIFHVNGDDVEAVVHACELAA
EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRNHPSALQIYRNKLLESGQVT
DDDIGNISQKVSTILNDEFLASKDYVPKRRDWLSAYWTGFKSPEQISRVRNTGVKPEILK
NVGKAITTLPDNFKPHRAVKKVYEQRAQMIETGEGLDWAMGEALAFATLLVEGNHVRLSG
QDVERGTFSHRHSVIHDQETGEQYCPLDHVIINQNEEMFTVSNSSLSEFGVLGFELGYSM
ENPNSLVMWEAQFGDFANGAQVIFDQFISSGEAKWLRQTGLVVLLPHGYDGQGPEHSSAR
LERYLQMSDDNPFVIPEMDTTLRKQIQECNWQVVNVTTPANYFHVLRRQIHREFRKPLIV
MSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNMHSDLEEGIRRLVLCSG
KVYYELDDERKKNNATDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYN
YIAPRLATAMTALGRGTFDDIRYIGRAPSASTATGFYSVHVKEQTELVQKAIQPEPIKTN
TTI
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggggtggcttagagctgggtcaagtgtggcaaagcttgccattaggaggactttgtct
cagggtggatcatatgctgcaagatcacgcattgttccttcacagagtcgatattttcac
accactgtctttaaatcaaaggcacagactgctcccgttcctcgccctgttccactttct
aagctaactgatagtttcttagatggaaccagtagtgtatacttagaggagcttcaaagg
gcctgggaagctgacccagatagtgttgatgagtcgtgggacaatttcttcaggaatttt
gttggtcaggctgccacatctccaggaatttcaggccagaccattcaggagagtatgcga
ttgttattgcttgtgagggcttaccaggttaatggtcacatgaaagcgaagttggatccg
ctgggtttagaggaaagggaaatccctgatgatttggatccagctttttatggttttact
gaagctgatcttgatagagaattctttttaggtgtgtggaggatggctggatttttatca
gaaaaccgacccgtgcagacacttaggtcgattttgactcggcttgagcaggcttactgt
ggaagcattgggttcgaatacatgcacattgctgagcgtgacaagtgcaactggttgaga
gacaagattgaaactccaacaccaatgcagtacaatcgccagcggcgcgaagtcattctt
gataggcttatatggagtacacagtttgaaaatttcttggctaccaagtggacaacagcc
aagagatttgggctagaagggggtgaaactttaattcctggaatgaaagagatgtttgat
agggctgcagatctaggggttgaaagcatagttattggaatgcctcacagaggaagattg
aatgtgctaggtaatgttgtcagaaagccacttcgtcaaatatttagtgagttcagtggt
ggtacaaggcctgtggatgaagttgggctttacacaggaactggtgatgtcaaatatcac
ttgggaacttcctatgatcgaccaacaagaggtggaaagagaattcatttgtctttagtt
gccaaccccagtcacttggaggctgtggacccagttgttgttggaaaaactagagcaaag
cagtattactccaatgacgaggataggaccaagaacatggctattttgattcatggagat
ggaagctttgctggacagggtgtagtctatgaaactcttcatcttagtgcacttccaaac
tacactactggtggaactatacatattgtagtcaacaaccaagtggcatttacaactgat
ccaagggcaggcagatcttcacagtattgtactgatgttgccaaagctttgaatgctccc
attttccatgtaaatggagatgatgttgaggcagttgtccatgcatgtgaacttgcagct
gaatggcgccaaaccttccattcagatgtggtggttgatttggtctgctaccgtagattt
gggcataatgagattgacgaaccatcatttacacagccaaagatgtataagatcattcgg
aatcacccctcagcacttcagatctaccgaaacaagttgttggagtctgggcaggtgaca
gatgacgacattggtaatataagtcagaaggtcagtacaattcttaatgacgaattcttg
gccagcaaagattatgttcccaaaagacgggactggctctctgcttactggacgggattc
aagtcacctgaacaaatttcacgtgttcggaacactggggttaaacccgagatattgaag
aatgttggcaaagcaatcacaacccttccagataattttaagcctcatagagcggtgaag
aaggtttatgaacaacgtgcgcagatgattgagacaggggagggccttgactgggctatg
ggtgaagcacttgcatttgctaccttgctggtggaaggtaaccatgttaggttgagtggt
caggatgttgaaaggggtacattcagtcatcggcattctgtgattcacgaccaggaaaca
ggggaacagtattgccctctggaccatgttatcatcaaccaaaatgaggagatgtttact
gtaagcaatagttctctttctgagtttggtgtgcttggattcgaattgggttactcgatg
gagaatccaaattcattggttatgtgggaagctcagtttggtgactttgctaatggtgct
caagtgatatttgatcagtttataagtagcggggaggcaaagtggctgcgtcaaactggt
cttgtagtgctgcttccccatggttatgatggacaaggtccagaacattcaagtgcacga
ctagagcgttatcttcagatgagtgatgacaatccttttgtgatacctgagatggataca
actcttcgtaaacaaattcaggagtgcaactggcaggtggttaacgttacaacacctgct
aattacttccatgttttgcggcgtcagatacacagggaattccgtaagcctcttatcgtg
atgtcccccaaaaacttacttcgtcacaaggactgcaaatcaaatctctctgaatttgat
gatgtccaaggccaccctggttttgataaacaaggaaccagatttaagcgacttataaaa
gatcagaatatgcactccgaccttgaggagggtatcagacggttggtactttgttccgga
aaggtctactatgagcttgatgatgagcgaaagaagaacaatgctaccgacgttgctatc
tgtcgtgtggaacagctttgcccatttccttatgacctaatccagcgggagcttaagcga
tatccaaacgcagagattgtttggtgccaggaagaaccgatgaacatgggtgcatacaac
tacattgcacctcgtcttgccactgcaatgactgctttgggcagaggaacctttgatgat
atcagatacattggccgtgctccatctgcttccactgctactggcttctattctgtgcat
gtgaaggaacaaaccgagcttgtgcaaaaggccattcaacctgaaccgatcaagaccaat
actactatctga
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