Gossypium raimondii: 105788441
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Entry
105788441 CDS
T04129
Name
(RefSeq) transcription factor PIF7 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
gra
Gossypium raimondii
Pathway
gra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105788441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105788441
Transcription factors [BR:
gra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
105788441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ufd2P_core
DUF6800
COLEC12
YqgF
Ribosomal_L28e
FapA
Motif
Other DBs
NCBI-GeneID:
105788441
NCBI-ProteinID:
XP_012470805
LinkDB
All DBs
Position
2:complement(33282743..33285176)
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AA seq
422 aa
AA seq
DB search
MSHCVAPNCWNLKHQSQEQVHFVEEEDNETNRSSHISNPMSNQEVAELTWQNGQLAFHGL
NRHLPTASSKPTWGISGDTLESIVHQATCLHTQNHNFSLLQHDQNQTPAVVSSIAASSGS
SGRLPTAAVVKKRARSSSDVCGEIPRGGVGKEYASACASASDAFCKENDDSTMMTWASHL
SPQTMKAKAVDEDYAYQDGSENQDEEQETRGETGRSQATRRSRASAIHNLSERQRRRHRI
KQKMNTLQKLVPNASKTDKASMLDEVIEYLKQLQTQVEMMSMRNMAAQMMMQQTRRQLQM
SALARMGVVMGIGILDDNNSLAPNPSPVTAPTRTFLPPPPPPPSFVTPPPMIPTRFAAAA
QANSDASSHGSIPSPDPYCTLLAQSMNMELYNNKMAAPYRPQINQTTQTSSNPSRSNNVA
KD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagccactgtgtagctccaaattgttggaatctaaagcaccaatctcaagaacaagtc
catttcgtggaagaagaagataatgaaaccaatcgatcttcccacataagcaaccccatg
tccaaccaagaagttgcagagctaacatggcaaaatggtcagctagctttccatgggttg
aataggcaccttcctactgcttcatcaaagccgacatggggtatttctggtgacacacta
gagtccatagtccatcaagccacatgccttcacacccaaaaccacaacttcagcttactt
caacatgaccagaaccagacaccggcagtcgtgagctccattgctgcatcatcggggagc
tctggtcgtttgccaacagcagcggtggtaaagaaacgggcgcggtcgagctccgatgta
tgcggggaaattccaagaggtggtgttggaaaggaatatgctagtgcatgcgcgagtgct
agtgatgcattttgcaaggagaatgatgatagtacgatgatgacttgggcatcccatctg
tcgcctcaaactatgaaggccaaagccgtggatgaggactatgcttatcaggatggatcg
gaaaaccaagatgaggaacaggagactagaggtgaaacaggtcgctcccaggccacaaga
cggagtcgagcatcagctattcataatctctctgaaaggcagagacgaagacatagaatt
aagcaaaagatgaatactcttcagaagctagtgccaaatgcaagtaagacagataaagct
tcgatgcttgatgaagtgattgaatacttgaaacaactccaaacacaagtcgaaatgatg
agtatgagaaacatggcggcccagatgatgatgcagcagacgcggcggcagcttcaaatg
tcggctttagctcggatgggcgtcgtaatggggatcggaatacttgacgataacaactcc
ttggctcccaatccttcaccagtcactgctcccacccgcacatttcttcctcctcctcct
cctcctccgtccttcgtgacgccgccgcctatgattccaacgcgcttcgcggcggctgct
caagcgaattcagatgctagctcacatggctccattccttcgcctgatccgtattgcact
ttactagctcaatccatgaatatggaactctacaataacaagatggcagcaccgtatcga
ccacaaattaatcaaactacacagacatcaagcaacccatcgaggtcaaacaatgtagca
aaggattaa
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