Gossypium raimondii: 105792257
Help
Entry
105792257 CDS
T04129
Name
(RefSeq) transcription factor BHLH42
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105792257
Transcription factors [BR:
gra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
105792257
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
bHLH_SAC51
TSC22
ACT_ACR9_3rd
Motif
Other DBs
NCBI-GeneID:
105792257
NCBI-ProteinID:
XP_012476197
UniProt:
A0A0D2R1W1
LinkDB
All DBs
Position
8:55241150..55247740
Genome browser
AA seq
685 aa
AA seq
DB search
MAAPPSSRLQKMLQAAVQSVQWTYSLFWQICPQQGILIWSDGYYNGAIKTRKTVQPMEVS
TEEASLQRSQQLRELYDSLSSGDTNQPARRPSAALSPEDLTESEWFYLMCVSFSFPPGVG
LPGKAYARRQHVWLTGANEVDSKTFSRAILAKSACIQTVLCIPILDGVLELGYTEKVQED
LGLVQHVKTFFNDGKAPNPPPPKPALSEHSTSNPAASSDYTRFHSPSIPLVYAAADPPVN
ADQGEYNNVDEEEEEEEEDDDDEEGDEEPESYSAETGRTTQQVPTENTLAVVAAEEPSEL
MQLDMSEDIKLGSPDDASNNLDSDFNMLAVSQSGNPTDNQRRAELFRDESNRRWQMLQEP
SCGSLQPLSTGPQPVDEMSQEDTHYSQTVSTILQAQLARWTESPSTVNAATYSTQSAFAK
WTTHSDHHLHSAVVEGTSQWLLKYILFTVPFLHNKYRDENSPKLRDAAVAAARFRKGTPN
EDLSANHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLRKKIQDLET
RNKQMEADNDRPRSADSMQRNSSSKDQRSGLTTRSSGPDKKKMRIAEATKQKTAEPAPQT
AETSVEVSIIESDALLELQCGYREGLLLDIMQMLREKLRIEITAVQSSLNNGLFTAELRA
KVKDNMNGKKVSIMEVKRAINQIIP
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgccgagtagtaggctacaaaaaatgttacaggcagcggtgcaatcggtt
caatggacgtatagtcttttctggcaaatttgtcctcaacaaggtatcttaatatggtcc
gatggatactacaatggagcaatcaaaacaagaaaaacagtgcaaccaatggaagttagt
acagaagaagcatctttacaaagaagccaacaactccgagaactttacgactcgttgtct
tccggcgacaccaaccaaccggctcgacgaccgtctgccgcgttgtcgccggaagattta
acggaatccgaatggttctatctaatgtgtgtctccttctcttttccccctggtgtaggg
ttacctggaaaggcatatgcaaggaggcaacatgtatggcttacaggtgcaaacgaagtt
gatagcaaaacattttcaagagctattcttgccaagagtgcttgtatacagactgtgctt
tgcattcctattcttgatggtgttcttgaacttggatataccgaaaaggtgcaagaagat
ttagggttagtccagcacgttaaaactttcttcaacgatggaaaagcaccaaaccctccg
ccaccaaaaccggctctctccgaacattcaacgtcgaacccggccgcttcatcggactac
actcgatttcattccccttccattcctctcgtttacgcagcagcggacccaccggtgaac
gccgaccaaggagagtataacaacgttgatgaagaggaggaggaagaagaagaagatgac
gacgatgaagagggagacgaagaacccgaatcgtactcggccgaaacgggtcgaaccacg
caacaagtcccgacggaaaacactctggcagtagtggcggcggaggagccgagcgagtta
atgcaattggatatgtcggaagatatcaagctcggttcacctgacgatgcatcgaataac
ttggactcggatttcaatatgttggcggtgagtcaaagcgggaacccaaccgacaatcaa
cggcgagctgagttgtttagagatgagtcgaatcggaggtggcaaatgctacaagaaccc
tcgtgcggtagtcttcaaccactttcaacagggccgcagccagtggacgaaatgtcacaa
gaagacacgcactattcacagaccgtctccactatcctccaagctcaactggcccggtgg
accgagtcaccgtcaaccgtcaacgccgccacctactccacccaatcagcatttgccaag
tggacaacccattcagaccaccacctccactccgccgtcgtcgaaggcacgtcacaatgg
ctcctcaaatacatcctattcaccgtaccattcctccacaacaaataccgcgacgagaac
tcccccaaattacgcgacgccgccgtcgccgccgcacggttccggaaaggaacccccaac
gaagacctcagcgccaaccacgtcctggcggagagacggaggcgcgaaaagctcaacgag
cggttcataatattaagatccttggtccccttcgtcactaaaatggacaaagcttccatc
ctcggcgacaccatcgagtacgtcaaacagctccgtaaaaagattcaagacctcgaaacc
cgaaacaagcaaatggaggccgataacgaccggccgagatcggccgattcgatgcagaga
aatagcagctctaaggatcaaagaagtgggttaacgacacgatcatcgggtccggataaa
aagaagatgaggatagcggaagcaacaaagcagaagacggcggaacctgcaccgcaaacg
gcggaaacgtcggtcgaagtgtcgataatcgaaagcgacgcgttgctggagttgcagtgc
gggtacagagaagggttgttgcttgatataatgcagatgttaagggaaaagctacggatc
gagataacggcggttcagtcttcattgaacaatgggttgtttacagctgaattaagagcc
aaggtgaaggataatatgaacgggaagaaagtaagcataatggaggtgaagagggcgata
aatcaaataataccataa
DBGET
integrated database retrieval system
