Gossypium raimondii: 105793131
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Entry
105793131 CDS
T04129
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic isoform X1
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
gra
Gossypium raimondii
Pathway
gra00906
Carotenoid biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
105793131
Enzymes [BR:
gra01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
105793131
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Motif
Pfam:
Lycopene_cycl
DAO
HI0933_like
Pyr_redox_2
FAD_binding_2
GIDA
FAD_oxidored
Pyr_redox_3
NAD_binding_8
Pyr_redox
FAD_binding_3
Motif
Other DBs
NCBI-GeneID:
105793131
NCBI-ProteinID:
XP_012477534
UniProt:
A0A0D2LRX1
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Position
7:52284130..52291709
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AA seq
532 aa
AA seq
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MMIATSVGARKFAAVAVSKSATWRSRRRKDPVSTKMAVSNNQRLISLEVSGSGAARESYV
AVNEDFADEEDYVKAGGSQLLFVQMQQHKEMDEQSKLADKLPPISIGDNILDLVVIGSGP
AGLALAAESAKLGLNVGLISPDLPFTNNYGLWEDEIKDLGLEKCMEHVWPNTIVYLDDDK
PITIGRAYGRVDRRLLHEELLKRCVESGVMYLSSKVESIVEATDGHNLVACEYEHVVPCR
LVVVASGAASGKLLQYEVGGPRVVMQSAYGIEVEVENNPYDPSMMVFMDYRDYAKEQVPC
LGDQYPSFLYGMPMSSTRVFFEETCLALKEAMPMDFLKKKLMSRLLAMGIRIVKVYEEEW
SYVPLGGSLPNMKQKNLAFGAAASMVHPATGYSIARSLSEAPRYASVIAKILKRDYSKGF
LTFERNNWNMSIEAWNTLWPQERKRQRSFFLFGLALLLQLDTEGSRTFFRIFFRLPSWMW
QGFLGSTLSSIDLVVFAFSMFVIAPMDMKMLLIRHLLKDPTATTMISTYLTI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgatgatagcgacgtctgtcggagctcggaaattcgcggccgtggccgtttctaagtcc
gccacttggaggtctcggaggagaaaagatccggtgagtacgaaaatggcggtttcgaat
aatcaacggttgatttcattggaggtgagtggtagcggagcggcgagggagagttacgtg
gcggttaatgaagatttcgccgatgaagaagattacgtaaaagccggcggatctcaactt
ctcttcgttcaaatgcaacagcataaggaaatggatgagcaatcgaagttagcggacaag
ttaccaccaatatcaatcggagataatatactagacctagtggtcattggcagtggacca
gctggtcttgcccttgctgcagagtcagctaagttgggtttaaatgttggactaataagc
cctgatcttcctttcaccaataattatggattgtgggaggatgagattaaagatcttgga
ctcgaaaagtgtatggagcatgtttggccgaatacaatagtatacctcgatgatgataag
cccatcaccattggtcgtgcttatggacgtgtcgatcgacgtttgctccatgaggagttg
ttgaagaggtgtgtcgaatcaggcgtaatgtatcttagctcaaaggttgaatcaattgtc
gaagctaccgatggtcataatctcgtagcctgcgaatacgagcatgttgttccttgcagg
cttgttgttgttgcttcaggagcagcttctggtaaattattgcaatatgaggtgggaggt
ccaagggtcgtcatgcaatccgcgtacggaatcgaggttgaggtggagaacaatccttat
gatcctagcatgatggtattcatggattatagagactatgctaaagaacaagttccatgt
ttaggagatcagtatccttcattcctttatggcatgcccatgtcatcaacaagagttttc
tttgaggaaacttgtttggctttaaaagaggccatgcctatggatttcttgaagaagaag
ctaatgtcaaggttactggccatgggaatccggattgtaaaagtttacgaagaggagtgg
tcttatgttccgctcggcggttccttgccgaacatgaaacagaagaaccttgcattcggt
gctgccgcaagcatggtgcatcctgctactggttattcaattgccagatcattatctgag
gctccgagatacgcttccgtgattgcgaaaatcctaaagagagattattcgaaaggcttt
cttacttttgaaagaaataattggaatatgtcaattgaagcttggaatactctttggcca
caagaaaggaaacggcaaaggtcattctttctctttgggttagcactcctattgcagctg
gataccgaaggcagccgaacattcttccgcatattcttccgtttgccaagttggatgtgg
caagggtttctcggttcgactctttcttcgatcgatctcgtcgtatttgccttttctatg
ttcgttatagcaccaatggatatgaaaatgttgcttattaggcacttgctcaaggatcca
actgcaacaactatgataagtacatatctcacaatttag
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