Gossypium raimondii: 105795211
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Entry
105795211 CDS
T04129
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15
KO
K12126
phytochrome-interacting factor 3
Organism
gra
Gossypium raimondii
Pathway
gra04075
Plant hormone signal transduction
gra04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105795211
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105795211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105795211
Transcription factors [BR:
gra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
105795211
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
105795211
NCBI-ProteinID:
XP_012480192
UniProt:
A0A0D2LYZ0
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Position
7:complement(33067448..33071944)
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AA seq
473 aa
AA seq
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MASDLPNVPSMRDPDFMELVWENGQVLIRGLSSKVTQKSSPFSSRSTANGSKDGGVADST
FAHPISGLSSLSKLDRQGVDANIVPVNNFNRLKSSYVPKQLVEDEVPCSSLQQFKGSKEE
KDRVNFSILRSNHASSGAMSTPGLAAGAEDLQGNKVRSAPPMSSNIPFGNEGDFMAKRMR
PTLPDSEPLKESFPDEQSEAVPNTRLAPDDTAFKGNPDQMVASSSLCSRGASNCPTYTFK
RRYEDTDLSKNTTMEEAEGTTKAAPVPRGSKGAKRKRKTEVHNLSERRRRDKINKKMRAL
KELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSIGNGVYMPPMMFPLPSAMQHINAQHL
GGYSPMALGMGMRMQMGLGCGAPPQFPTSLMTGAPAVPGNPEARFNMLGFPDQMLLRSMS
HSPFLSSAASFTPQSVQPPAAVVSQSAAPPAAQVDLLGGANPLSTSKDSYPTH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgacttgcccaatgtaccttccatgcgcgatcctgatttcatggagctggta
tgggaaaatggtcaagttctcattcgaggtttatcgtccaaggtaactcaaaagagttcc
ccgttctcatcgcgttctactgcgaatggatcaaaggatgggggggttgcagattccacc
ttcgcccatcccatatcaggtctctccagtctctcaaaactggatcgtcaaggcgtggat
gctaatattgttccagtaaacaacttcaatcggttaaaatcaagctacgtgcccaagcaa
cttgtagaagacgaggtaccttgctcttccttgcagcagtttaagggatcaaaggaggaa
aaagatagggtgaacttttccatcttaagatcaaaccatgcaagctctggtgcaatgagc
actccaggattagctgcaggtgctgaggatttacaaggcaataaagtcagatctgcgcct
ccaatgagtagcaacattccctttggaaatgaaggtgatttcatggcgaagcgaatgagg
ccaacgttaccagattctgagcctctaaaagaatcattccctgatgagcaatccgaagct
gttccaaatacgagattagcgccggatgatacagcttttaagggaaatccagaccaaatg
gtggcatcgtcttcattatgttcccgtggggcttcaaattgtcccacgtacacttttaaa
aggagatatgaagacactgatctcagtaaaaatacaacaatggaagaagccgagggaacg
acaaaagcagcgccagttccacggggaagcaaaggtgctaagagaaagagaaaaacagaa
gttcacaacctatctgaacggaggcgaagagataaaatcaacaagaagatgcgtgcattg
aaagagcttatacccaactgtaataaggtggataaagcttcgatgcttgatgaagcaatc
gagtatttaaagacccttcagcttcaagttcagatgatgtcaataggaaatggggtatat
atgccaccgatgatgttccctttgccatcggcaatgcaacatataaacgcacagcatttg
ggtgggtattctcccatggcacttgggatgggtatgagaatgcaaatgggtcttgggtgc
ggcgccccaccacagttcccaacttcactaatgacaggagccccagctgtgcctgggaat
ccggaagctagattcaacatgcttgggtttcctgatcagatgttactaaggtccatgtca
cattcaccttttttatcttcggctgccagtttcaccccacagtcggtccagccacctgcg
gctgtggtttcgcaatctgctgctcctcctgcggcgcaagtggaccttctaggtggtgct
aatccactttcgacatctaaggattcatatccaacacattaa
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