Gossypium raimondii: 105798358
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Entry
105798358 CDS
T04129
Name
(RefSeq) nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105798358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105798358
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105798358
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_1st
Ig_NUP210_7th
Big_2
Ig_NUP210_5th
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_2nd
Ig_NUP210_16th
Invasin_D4
Ig_NUP210_9th
Motif
Other DBs
NCBI-GeneID:
105798358
NCBI-ProteinID:
XP_052476812
LinkDB
All DBs
Position
9:9028329..9050607
Genome browser
AA seq
1953 aa
AA seq
DB search
MSKMIRFIFWLFSTVSLTAVIGTASHSSSGPHIADVNILLPPKMTNPVEYRLQGSDGCFK
WSWDHHEILSVLPEYNVTNHCSTSARLRSIAPYSGRKETAVYARDVHSGTVIRCKVFIDN
FDRIQIFHNSIKLDLDGLATLRVRAFDTEDNVFSSLVGLQFMWKLMPKTSGLSHHLAHVP
LKDSPLSDCGGLCGDLDIQIKLEEKGVFSDLFVVKGIHIGHENVSVQLLEPPLKGMGDKI
VLTVAEAMSLYPPSPVFVLIKATLHYSLKVIRENVPQEVSLPSPHHRWSVTNSSVAEMDS
TMGVIHALTLGETTVIVEDTRVDGHSQMSSLKVVLPDTLSMYISLFSASGDPIEGMEPIP
PMARWYVVSGKQYLIQLKVFSRGPYAQEIYITENDDIEFYDNQSGYWKIVPVLEPIASRY
GWRSARILEATSEGLGKLTASLVYYNGHHDTKEVLKVMQEVIVCDQVEFSLEKVTGESQI
ILLPWAPAVHQEMELKAAGGCAKESSDYKWFSSDITVISVTAYGVVQAKKPGKATVKVVS
SFDSFNYDEVMIEVSIPSSMVMLQNFPAETVVGSHLPAAVSMKASNDAYFSRCDAFHSFI
KWKAGSESFIVTNATGEAPVLEKEDNLELHVPVDGPPCSWTYIYASASGQAMLHATFSKE
YHHIDPSLSGPIVLRATSRIASYMPLTLHQAGDGNRFGGYWVNTARIEATNQLEDRDKVY
LVPGTQVDVILHGGPERWDKGVEFVQKVEIFDEEHAHDNGVDVHLISSSHGSLYRLLCQT
LGTYRLVFKRGNLVGDDHPLPTLVEASLSLACSLPSSVVVIVDEPVNNRDVIRTAIQADR
SPGQIQVTPVTVANGRTIRVAAVSISTTGEPFANSSSLCLKWELGSCDSLAYWNHAYDSE
NYNTSSWERFLVLRNESGSCIVRATVTGFFGSSSADRYSAKLLEGSDNFLTDAARLQLVS
TLRVSPEFNLLYFNPNAKTNLSITGGSCFLEAVVNDSRVIEVTQSPPGLQCLQLILSPKG
LGTAVVTVYDIGLTPNLVASVVVQVADIDWIEIMSGEEISLMEGSSKSIGLMAGVDDGST
FDIHQYAYMNIHVHIEDDIVELADKDDFSSPSGRYIGAQTFKIRAKHLGVTTLYVSARRH
SGHELLSQAIKVEVYAPPTIHPPNIFLVPGASYLLTIKGGPTLGAFVEYTSTDDAIATVD
KTSGRLTATSPGNTTLLATVYGNGGNVICQADSSVKVGVPSLAILNVQSEQLAVGRETPI
YPLFSEANLFSFYGLCKDYKWTIEDEEVLTFGVPLVGSEAVQRVSYVDNKELSFINVLYG
RAPGRTNIAVSFSCDFISSGSHLEARTYNASLSLLVVSDLPLALGALITWLLPPHYTTSS
ILPSSAESHGQKDGQNRKGSIIYSLLRNCEEATEASQRAVSIDGDKIKTEESNNLACIQA
KDRITGRTEIASCVRVAEVEQIRITNKELPVHSIDLAVGAEIELSISYHDAIGNPFYEAS
NVILHHAETNYPDVVSVNNTRDTNMIHLKAMRHGRALLRVSIDNHPQKSDYMLISVGAYV
HPQNPVLHQGSSINFSVVGSDDQASGHWHSVNESVIVLHTQSGQAEAVGEGSTQVSFESS
NVKLRTTVTVLPGSTLVVEAPKEMLTNVPFPSQGFSFSVKFSDTNDKINTVGSSKGAPYD
CRVDPPFVGYAKPWIDLDTGNSFCLFFPYSPEHLVRTIPKLKDMKPYIYVSINASMKEHS
HVSGSASALFVGGFSIMQMGKDIAQINLTPDFNKTIVTILGNTDVEIHWRGQDLLAINPI
QKEGFGLSCHIDYEVKALSAKRFADKIIVKLPSTGQRVEVDVNYEPDEKSEATINFSFWA
KVMGSIALTVITLIIGFICFLDRPLGSSQPPSTPLCSSSISAPVTPDRRSPLHLDEQSPR
TPQPFVDYVRRTIDETPYYRREGRRRFNPQNTY
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagatgattcgcttcattttttggcttttttccactgtttcgttaacggcggtg
atcggaacggcgtcgcattcgagctctggtcctcacatagctgacgtcaacatactttta
cctccgaaaatgacgaaccccgtcgaatatcggcttcaaggaagcgacggttgtttcaaa
tggtcgtgggatcatcatgagattttatcagttctgccggagtataatgtgaccaatcat
tgctcgacaagtgcacggctgagatcgattgcgccgtactccggtagaaaagaaactgcg
gtttacgctagggacgtgcacagtggaaccgtgatccggtgcaaggttttcattgataat
tttgatagaattcaaatatttcataattctattaagcttgatcttgatggactcgctact
ctccgagttcgtgcctttgatactgaagacaatgtgttttcatcattggtgggtttacaa
ttcatgtggaagctgatgccaaaaactagtgggttgagtcatcaccttgcccatgttcct
ttgaaggattctcccttaagtgactgtggtggactgtgtggtgacttagatatccagata
aaacttgaagaaaagggtgtattttcagatttatttgttgtaaaaggcattcatattggc
catgagaatgtttcagtacaattgcttgagccaccgttaaagggcatgggtgataagatt
gttctaactgttgcagaagctatgtcactatatccaccgtcacctgttttcgtcctcatt
aaggctactctccattatagtcttaaggttatccgtgagaatgttcctcaagaggtatct
cttccatcgccgcatcatcgatggtctgtcacaaacagttcagttgctgaaatggactct
acgatgggtgtcattcatgcgctaacattgggtgaaacaactgtcattgttgaagatact
agagtcgatggccatagtcagatgtcatctcttaaggtggtcttgccagataccttgtct
atgtacatatcactattttctgcttccggtgatccaatagaaggaatggaacccattcca
cctatggcacgttggtatgttgtttctggaaaacaatacctcattcaactcaaggttttt
tctcggggtccatatgcacaggaaatctacattactgagaatgatgatattgagttctat
gacaaccaatctggctattggaaaattgtcccagtgttagagcctattgcatctagatac
ggctggaggagtgctagaattttggaagctacttcagagggactggggaaactgacagcc
tctttagtttactataatggacatcatgataccaaggaggttctcaaggttatgcaagag
gttattgtatgtgaccaagtagagtttagcttggaaaaagtaactggtgaatctcaaatt
attctccttccttgggcacctgcagtacatcaggagatggagttaaaggctgctggaggt
tgtgcaaaagagtcgagtgactataaatggttttcttcggacattactgttatttcggtc
actgcatatggagttgtccaggcgaaaaagcctggtaaagctacagtgaaggtggtgtca
agttttgattcattcaattatgacgaggttatgattgaagtttcaattccatcctctatg
gttatgttacaaaacttccctgctgagactgttgtgggatcacacctcccagctgctgtt
tcaatgaaagcatcaaacgatgcctacttttctagatgtgatgcatttcattcctttata
aagtggaaagctggaagcgagtctttcattgttaccaatgctacaggagaggcaccagtc
cttgaaaaggaagataatttggaactccatgtaccagtagatggtcctccatgttcatgg
acttacatatatgcttctgcatctggtcaagctatgctgcacgcaacattttcaaaggaa
tatcatcatattgatccctctttaagtgggcctattgttttaagagcaacttccagaatt
gcatcatacatgcctcttactctgcaccaggcaggtgatgggaaccggtttggtggttac
tgggttaatacagctcgaatagaagctactaatcaactagaagatcgagataaggtatat
cttgtccctggaacacaagtagatgtcattcttcatggagggccagaaaggtgggacaaa
ggtgttgagtttgtgcagaaagtggagatttttgatgaagaacatgcacatgacaatggg
gttgatgttcatctgatttctagcagccatggcagtttgtatagacttttatgccaaaca
ctggggacctatagacttgtttttaaacgtggaaatttggttggagatgatcatcctctt
cccacattagtggaagcttcattgtctcttgcttgcagccttccttcctcagttgtggta
atagtggatgaacctgttaataatcgagatgttattcggactgcaattcaagctgaccgt
agcccggggcaaattcaagtcaccccagttactgtggctaatgggcgaactattagagtg
gctgctgtcagtattagtaccactggggagccttttgcaaactcttcttccctgtgctta
aagtgggaattaggcagttgtgacagtctggcttattggaaccatgcttatgattcagag
aactataatacgtctagttgggagaggttcctggtcttgcgaaacgaatcgggatcgtgt
attgttcgtgccaccgttactggattctttggtagttcctcagctgatcgttattctgct
aaattgctagaaggttcagataattttcttacagatgctgcacggttacagcttgtttct
actctaagagtgagtccggagttcaatctgttatatttcaatcctaatgctaagacaaat
ttgtcaattactggagggagctgtttcttggaagctgttgtgaatgattctcgagtcatt
gaagttactcagtcaccacctggtttacaatgcttacaactgattttatcaccaaaaggc
cttggaactgcagttgtgacagtttatgatattgggcttactcctaatcttgtggcttct
gtcgtggtccaagttgcagatatagactggattgagattatgtctggagaagagataagc
cttatggaaggaagttcaaagtcaattggtttgatggctggggttgatgatggaagcact
tttgacattcatcagtatgcgtacatgaatatccatgtgcatattgaggatgatatagtt
gaacttgcggacaaggatgatttctcaagccctagcggtcgatatataggtgcacagact
ttcaaaatcagggcaaaacatcttggtgtcacaactctttacgtcagtgctagacgacat
tctggacatgaactgttgagtcaagctataaaggttgaggtttatgctccaccaacaatt
cacccaccaaatattttcctagtaccaggcgcttcttacttgctcactattaaaggaggt
ccgacccttggtgcctttgtggaatatacaagtacagatgatgccattgcaacagtggac
aaaacttcagggcgattgactgcaacttcacctggaaatactacactgcttgccactgtt
tatgggaatggcggtaatgtgatttgtcaagcagatagcagtgttaaagtgggagtacca
tctttagcaatattgaatgtacaaagtgaacaacttgctgttggccgtgagacaccaatt
tatcctttattttctgaggcaaacttattttctttctatgggctatgcaaagactacaag
tggaccatagaagatgaagaggtgttaacatttggggttccactggttggttcagaagca
gttcaacgcgttagttatgtggataacaaagaacttagttttatcaatgttctgtatgga
agggccccagggaggacaaatattgcagtttcattctcatgtgactttatttcttctggt
tcacacttggaggcaaggacttacaatgcttctctctcactattggtggtgtctgatctt
cccctggcacttggagctctgatcacatggcttcttcctccccattataccacatctagc
atcttaccttcatcagcagagtcacatgggcaaaaagatggtcagaatcgcaaaggaagc
ataatctattctttgttaagaaattgtgaggaagcaacagaagcttcacagcgtgctgtt
tctattgatggggacaaaataaaaacagaagagagcaataatcttgcttgcattcaagcc
aaagatcgcatcactgggagaactgagattgcttcttgtgtccgggttgctgaggtggag
caaataagaataacaaacaaggagcttccagtccattcaattgatctcgctgttggtgca
gaaattgaactttcaataagttaccatgatgctataggaaatcccttttacgaggcttct
aatgttattctccaccatgctgaaactaattatcctgatgtcgtctctgttaacaatacc
cgtgacaccaatatgattcatctaaaggcaatgcgacatggtagggctcttctccgagta
tcaattgataatcatccacagaagtcggactatatgctgatttcagttggtgcctatgtg
catccccaaaatccagttcttcaccaggggagttctattaacttcagcgtagtaggctct
gatgatcaagcttcaggtcactggcatagtgtcaatgaaagtgttatagttttacacact
caatctggacaggcggaagcagttggagagggatcgacccaagtttctttcgaaagttca
aatgtcaagctgcgaacaacagtcacagttctacctggaagtacacttgttgtggaagcc
ccaaaggagatgctgacaaatgttccgtttccctcccaaggatttagcttttccgtgaag
ttcagtgatacaaatgacaagatcaacactgttggaagcagtaaaggagccccatatgac
tgtagggtagaccctccttttgtcggctatgcaaagccatggatagaccttgatactggc
aactcgttttgccttttcttcccttactccccagagcatttggtccgcaccatacccaag
ttgaaggacatgaaaccatatatatatgtttccattaatgcttcaatgaaagaacacagc
catgtttctggatctgcatctgcactttttgtcgggggattttccataatgcaaatggga
aaggatatagcacagataaatctgacaccagactttaacaagactattgtaaccatcttg
ggaaacacagatgttgaaatccactggcgtggccaagatttgttagcaatcaatcccatc
cagaaagaaggatttggtctcagttgccacatagattatgaggtaaaagcacttagtgcc
aagcgatttgcagataaaatcattgtcaaactcccatccaccggtcaaagagtggaagtg
gatgtcaactatgaaccagatgaaaaatctgaagctactattaacttttccttttgggcg
aaggttatgggaagtattgccctaacagtaatcacactgatcattggcttcatatgtttc
cttgaccgacctcttggatcatcccagccaccatccactcctctgtgcagttcaagcata
tcagcacctgtaacgccagaccggagaagtccccttcatttggacgaacaatctccacga
acaccgcagccatttgtagattatgtgagaagaacaatagacgaaactccatactatcgg
cgagaaggtaggaggaggtttaatcctcagaacacatactaa
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