Gossypium raimondii: 105803102
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Entry
105803102 CDS
T04129
Name
(RefSeq) transcription factor BHLH42
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105803102
Transcription factors [BR:
gra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
105803102
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Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
bHLH_SAC51
DUF7050
ACT_ACR9_3rd
Ribosomal_60s
TSC22
INO80F
ACT_4
Motif
Other DBs
NCBI-GeneID:
105803102
NCBI-ProteinID:
XP_012490555
UniProt:
A0A0D2QS79
A0A0G2UY99
LinkDB
All DBs
Position
11:complement(52023916..52028922)
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AA seq
660 aa
AA seq
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MAVPPSNRLRNMLQAAVQSVQWTYSLFWQICPQQGILVWSDGYYNGAIKTRKTLQPMEVS
AEEAALQRSQQLRELYDSLSAGESNQTVRRPSAALSPEDLTESEWFYLMCVSFSFPPGVG
LPGKAYARRQHVWLTGASEVDSKIFSRAILAKSARIQTVLCIAVHDGVVELGTTEKLQED
LELVQHVKTFFTDDIIRNPKPALSEHSTSNPADYTRFHSPALPPTYAAANPNLDGNEEEE
EEEEEEEEEEEEEEGPESDCAETDRNSRRMVRVAAEPSELMMQLEMSEDMRLGSPDDASN
NLDTDIHMAGVSQAEKQRRAESFKAELCRRWEMVQEEEAANSGLESRYSGLLPMDGLAQE
NTHYSQTVSAILQGQPTRWADSLPTYSTESAFSKWTIRSDHHQLPVALEGASSQWLLKYI
LFSVPLLHSKYRDENSPKARDADAAARFRKGTPQEELSANHVLAERRRREKLNERFIILR
SLVPFVTKMDKASILGDTIEYVKQLRKKIQELETRNKEIEAHNERPRSADSLQRSGVTVS
ERARSLGPEPGREKRKMRIVTESRGEARPKKTQPETALEVSIIENDALLELQCEYREGLL
VDIMRMLREQLRIEITTVQSSLNNGVLAAELRAKVKDNVNGKKVSITEVKWAINQMIPSF
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgccgcctagtaacaggcttcggaatatgttgcaggcggcggtgcaatcagtt
caatggacctacagccttttctggcaaatttgtccccaacaagggatcttagtatggtca
gacggatactacaatggagcaatcaagacacgaaagacactgcaaccaatggaggtcagt
gcggaagaggcggctttgcaaaggagccaacaacttagagagctctacgactcattatcc
gccggagagtcgaaccagacagtccggcgaccatctgcagcgttgtcaccggaggactta
accgagtccgaatggttctatttgatgtgcgtctccttctcttttcctcctggagtaggg
ttgcctggaaaggcatatgcaaggaggcagcatgtatggcttacgggtgcaagtgaggtt
gatagtaaaattttctcaagagctattcttgctaagagtgctcgtatacagactgtgctt
tgcattgctgtccacgatggtgttgttgaacttggcactacggaaaagctccaagaggat
ctagagttagtccaacatgtcaaaaccttcttcacagatgatataattcgtaaccccaaa
ccggctctctccgaacactccacttcgaaccccgccgattacactcgcttccactctcct
gcacttcctcctacgtacgcagctgcaaaccctaacctagacggcaatgaagaagaagaa
gaagaagaagaagaagaagaagaagaagaggaagaggaagaaggacctgaatcagactgt
gccgaaacggatcgaaatagccgccgaatggtgagagtagcagctgagccaagcgagtta
atgatgcagttggaaatgtcggaagacatgaggctagggtcaccagacgacgcatcaaat
aacttagacacagatattcacatggcaggcgtaagtcaagcagagaagcagcggcgagcc
gagtcgtttaaagccgagttgtgtaggaggtgggaaatggtacaggaggaggaggcagca
aacagtgggcttgagtcacgttattcagggctactgccgatggatggactagcacaagaa
aacacccactattctcagaccgtctccgccatcctccaaggccaaccaacccgttgggcc
gactcattgccaacctactcaacggaatcagcgttttccaagtggacaatccgttcagac
caccaccagctcccagtggccctcgaaggagcgtcctcccagtggctcctcaagtacatt
ctatttagtgttccgctcctccacagcaaataccgcgacgagaactcacccaaggcacgt
gacgccgatgccgccgccaggttccgcaaggggaccccgcaggaggagctcagcgccaac
catgtactagcagagaggaggcgacgggaaaagctcaacgaacggttcatcatattaaga
tccttggttccattcgttaccaaaatggataaagcttccatactcggggacaccatcgag
tacgtcaaacagttacgtaaaaagatacaagaactggaaacacgaaacaaggaaatagaa
gcccataacgaacggccaagatcagcagattcgctgcagagaagtggggtaacggtgtcg
gagagggcacgatcattgggtccagaaccagggcgggagaaaaggaagatgaggatagtg
acagagagtagaggtgaagctaggccaaagaagacgcagcccgaaacggcgttggaggtg
tcgataatagaaaatgacgcgttgttggagttgcaatgcgagtatagggaagggttgttg
gttgatataatgcggatgctgagggaacagcttcgaattgagataacgacggttcagtct
tctttgaataatggagtgttagcagctgagttgagagccaaggtgaaggataatgtaaac
ggaaagaaagtaagcataacggaggtgaagtgggccataaatcaaatgataccttcattc
taa
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