Granulicella sp. 5B5: GOB94_05030
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Entry
GOB94_05030 CDS
T08433
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
grb
Granulicella sp. 5B5
Pathway
grb00300
Lysine biosynthesis
grb00550
Peptidoglycan biosynthesis
grb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GOB94_05030
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GOB94_05030
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
grb01011
]
GOB94_05030
Enzymes [BR:
grb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GOB94_05030
Peptidoglycan biosynthesis and degradation proteins [BR:
grb01011
]
Precursor biosynthesis
Amino acid ligase
GOB94_05030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
Motif
Other DBs
NCBI-ProteinID:
QMV18126
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Position
complement(1171214..1172716)
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AA seq
500 aa
AA seq
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MKWSEAVAAVRTVEVAGRGDVDVRGVQYDSRRVSGGDVFVAMRGGTTDGNRYIDAAIMKG
AAAVVTDSREVFDELRERQPELAVALVEHGRRALAEVSAEVFGHPERVLKLSAVTGTNGK
TTTAFLLEQMLQSVGRKCVLLGTIETHVAGVVRESEHTTPESRDVLALFYEGVRAGCTEA
VMEMSSHALDQERVWGLPVDVAMFTNLTQDHLDYHGTMERYAEAKARLFAGAGAPPPQVA
VINCDDPYEETMCREFCGETLMTYGVDEGDWRAEEIELGAGLTRFVWRTPQGAVRIESPL
TGRVNVYNLMAAACAAFARGLTMKEIAKAAGSLKQVPGRFEVVPGSREAGFTVVVDYAHT
DDALKNLIALARDLVKEQRGRVITVFGCGGDRDRTKRPKMGRVAAKGSDLVVVTSDNPRS
EEPMAIVAEVLAGVRETDTACVVEADRAKAIEMAIRAAGPGDIVLLAGKGHEKVQIFADG
AVPFDDVAEAARVLKSEVHA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggagcgaagcggttgcggcggtgcggacggtggaagtcgcggggcgcggcgat
gtggatgtgcggggcgtgcagtatgactcgcggcgggtgagcggtggtgatgtgtttgtt
gcgatgcgcggtgggactacggatgggaaccggtatatcgacgccgcgattatgaagggg
gccgcggcggtagtgacggactcgcgtgaggtgtttgacgagctgcgggagcggcagccg
gagcttgcggttgcactggtagagcacgggcggcgcgcgctggctgaggtgagtgcggag
gtctttggacatcctgagcgggtgttgaagctgagtgcggtgacggggacgaatgggaag
acgacgacggcgtttctgctggagcagatgctgcagagcgtggggcggaagtgcgtgctg
ctggggacgattgagacgcatgttgcgggcgtggtgcgggagagtgaacatacgactccg
gagagccgcgatgtgctggcgctgttttatgaaggggtacgtgcgggttgcacggaagct
gtgatggagatgagcagccatgcgctggaccaggagcgcgtgtgggggctgccggtggat
gtggctatgttcacgaacctgacgcaggaccatctggattatcacgggacgatggagcgg
tatgcggaggcgaaggctcggctgtttgccggtgctggtgcgccgccgccgcaggtggcg
gtgatcaactgcgatgatccgtatgaagagacgatgtgccgggagttctgcggtgagacg
ttgatgacctatggtgtggatgaaggcgattggcgtgctgaggagatcgagttgggcgcg
gggctgacgcggtttgtgtggaggacgccgcagggggctgtaaggatagagtcgccgctg
acggggcgcgtgaatgtgtacaacctgatggcggctgcgtgtgcggcttttgcacgcggg
ctcacgatgaaggagattgcgaaagccgccgggagtttgaagcaggtgccgggaaggttt
gaggtggtgccggggtcgcgggaggcagggtttacggtggtggtggactatgcgcatacg
gatgatgctttgaagaacctgattgcgctggcgcgcgatcttgtgaaggagcagcgcggg
cgtgtgattacggtgtttggatgcggcggcgatcgcgaccggacgaagcggccgaagatg
gggcgtgttgcggcgaagggcagtgatctagtggtggtgacgagtgataatcctcggagc
gaggagccgatggcgattgttgcggaggtgctggctggcgttcgcgagaccgatacggct
tgtgtggtggaggctgatcgagcgaaggcgattgagatggcgatccgtgctgcggggccg
ggagatattgtcctgctagcgggcaaggggcatgagaaggtgcagatctttgcggatggt
gccgtcccgtttgatgatgtggccgaggccgcacgagtgttgaagagcgaggtgcatgcg
tga
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