Granulicella sp. 5B5: GOB94_15620
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Entry
GOB94_15620 CDS
T08433
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
grb
Granulicella sp. 5B5
Pathway
grb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GOB94_15620 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grb03400
]
GOB94_15620 (nth)
Enzymes [BR:
grb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GOB94_15620 (nth)
DNA repair and recombination proteins [BR:
grb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GOB94_15620 (nth)
Prokaryotic type
GOB94_15620 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
DUF6615
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QMV19951
UniProt:
A0A7D7XNG9
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All DBs
Position
complement(3700205..3701026)
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AA seq
273 aa
AA seq
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MPTKSTTTRQPRKGLTPPQKLTPTERKLAIEGVPAAKARKIAASEPLFAKLKNGKTKTPL
APERLAAILDGLRRLYPNVVCALTHRNAFELVIATALSAQTTDVNVNKVTPTLFKLYPTP
KALAAASLPEIEEVIRSTGFYKSKAKNIQGAAKVLVEQFSGKVPETIEELIQLPGVARKT
ANVVLGSWFGIPAGVVVDTHVLRISKRLELTKYDEPVKVEQDLMQILPQDRWIQFSHEVI
HHGRQICLARKPKCAECGIETLCNAVDKTWSSH
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgaagtccaccacgaccaggcagccacgcaaaggcctcaccccaccccagaag
ctcacccctaccgagcgcaagctcgccatcgaaggggtccccgccgcgaaggccaggaag
atcgcagccagcgaacccctcttcgccaagctcaaaaacggcaagacgaagacgccgctc
gcccctgagcgtctcgccgccattcttgatggacttcgccgcctctaccccaacgtcgtc
tgcgcgctcacccaccgcaacgcgtttgagttggtgatcgctacggcactttcggcacag
acgaccgatgtgaatgtgaacaaggtgacgcctacgctgttcaaactgtatccaacgccg
aaggcgctggctgcggcatcgctgccggagattgaagaagtcatccggagcacggggttt
tacaagtccaaggccaagaacattcagggcgccgctaaagttctggttgaacagtttagc
ggtaaagtgccggaaacaattgaggaactgatccagcttcctggggtcgcgcggaagacg
gcgaatgtggtgttggggagttggtttgggattccggccggggtggtggtggatacgcat
gtgctacgaatcagcaagcgactggagctgaccaagtacgatgagccggtgaaggtagag
caggacttaatgcagattctgccgcaggaccgatggatccagttcagccacgaggtgatt
catcatgggcggcagatttgcctggcacggaagccgaagtgcgcggagtgtggaatcgag
acgctctgtaacgctgtggataagacgtggagctcacattaa
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