Garra rufa (doctor fish): 141286933
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Entry
141286933 CDS
T11039
Symbol
plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
141286933 (plxnd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
RAMP
Motif
Other DBs
NCBI-GeneID:
141286933
NCBI-ProteinID:
XP_073675164
LinkDB
All DBs
Position
15:16901727..16975746
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AA seq
1897 aa
AA seq
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MPPSTADRSSLGLLATLFAAFLAALQTRSAGALQIQQAFASPNRTNNFVVDAVSRRVYLA
AVNSLYQLNATLAREVEMRTGPVRDNPLCHAPQLPQATCEHEKTLTDNHNKLLALDREQG
VLLACGSVYQGFCELRSMDNVSRVAVKFPQDGATVFPSMLNIVANHENASTVGLVFRSHG
GAPRLLVGATYTGMGTEYFPKNHSKEDLRFENTPEIAIRSLNTKDLGRLFTYDINPSEDN
VFKIKQEVKQKNKLNFVHAFVLKSYSYIAINNDANTGLKESQPNSILARICLDTDGPRRS
SESRKLTESYIQMGIQCGSNGIIYNRLLSIYPADIGAQSAAGPEPYLFGVFARAGGQSAV
CAFRVADVEEMIRQGRRNCSNGPNSDVQVLDSVIQGSGAECERKGAIKLQEEQLNCGAAH
LQHPLALRKPLRARPIYEALGLSSIAVDNVHNRTVMFLGTSRGRLRKLSLLANLSVANQW
SLKLAAYEPVHHIMTFDPSDHNYLYLMTTHHFLRVQVSACGQYSSCNECMSAGDAHCGWC
TLDRRCSVQKDCSSGTLSRSWISAGDGIQQCPTMTITPSEISISANMRNVGILINGSMPD
LQGLQVECYYGTGIATNATVHLDYGTEQIQTCPLPPSHMYPNIPFGTDHVTVPVAIRVNG
VPVVSGSFIIYECKRTGEIHLKTACTSCLSTPWRCYWDPKLNVCVSSKDNTPGIFLENST
SCPRMVAYDVPPLPTGSTHVFTLELKNIEHGTELDCDFGDGQLYGAQWLDGPSVNCSGVT
LKTTMWSKIFHLNLRRKGTGTYIDSPKAMTVAVYSCSAGDSDCSQCRGRQTQGHMCVWCD
NSCQQQDQCQTITTRCPDPHIHKIEPLSGPLTGGTLLTVQGRNLGHSAAQLNVSIGDVPC
SILPQYYTVSVRLVCETAASWKQMSDQVTVNVAGDAVGVSKDIFSFVEPKLLEFTPRQGP
LAGGTRLTIHGQFLDAGSTVNVNINRTQNCSIFMLSSEVIKCVMPPAEPAVADNVSVCVV
YDGRPCLSASPNFTFTYEKNPTISYIKPNKSFLSGGRSISVTGYGFNLVQSVRMEVSGVG
QTNCSCVSSTLIVCESPAASQSQQATAHFYLNEVLYRGEDASPMGQGPDEDEEPHADVFH
FDYVEDPQFYTANKEKLIKHHPGEPLILIINKGPSELDLTPQEYSVTIGSDLCDITFHNE
QLFHCTINRSLSASTGDLPVTVHVGNFQKVIAMVQMGGGSELAIVVSIVVCCVLLLLCTV
ALVVYCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRTQGIPF
LEYKQFVTRTFFPKMCCDYERRLVQPMYENDPLGPRALSETHPLLQDWQSSNSMRPNLEE
GITLFSTLLNNKHFLVTFVHALEQQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKDLLV
DLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQINKG
SIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGYGMDSVSVRVMNTDTICQVKEKIL
EAFYKNLPFSQWPREEDVDLEWFPEGRSSRILQDLDDTSVMEDGRKKLNTVFHYQIPDGA
SLAMSMKDKRENTLGRVKDLDTEKYVHLVLPHDELTENRKYHRHSHRKKVLPEIYLTRLL
STKGTLQKFLDDLFQAILSIPPEKPPLAVKYFFDFLEEQADKRGITDPDTLHIWKTNSLP
LRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSLSDLQLGKDSPTNKLLYAKEI
PEYKKRVQCYYKQIQEMAPLSEQEMNAHLAEESRRYRNEFNTNLALVEVYKYAKKYRNQV
VSALDSNPTARRTQLQHKFEQVIALMEDNIYECSSEA
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttctacagcggacagatcctctctcgggctcttggcgacgcttttcgccgcg
tttctagcggctctccagacgcgctcggccggcgcgctgcagattcaacaggcattcgcg
tctcccaaccgcaccaataacttcgtggtggacgccgtgtcccgccgggtttacctggcc
gcggtcaacagcctgtaccagctaaacgccacactcgccagggaggtggagatgcgcacg
ggacccgtgcgggacaacccgctgtgccacgcgccgcagctgcctcaggcgacttgcgag
cacgagaagactctcaccgacaaccacaacaagctcctcgcgctggaccgcgagcagggt
gtgctgctggcctgcggctctgtgtaccagggcttctgcgagctgcgcagcatggacaac
gtgtcccgggtggccgtcaagttcccgcaggacggggccaccgtgttcccgagcatgctc
aacattgtggccaaccacgaaaacgcgagcaccgtcgggctcgtctttcggagtcacggc
ggcgcgccgcggctgctggtgggagcgacgtacacgggcatggggaccgagtatttcccc
aagaaccacagcaaggaggacctgcgcttcgagaacacgcccgagatcgccatccgctcg
ctcaacaccaaggatctcggccggctcttcacctacgacatcaacccgtccgaggacaac
gtgtttaaaatcaagcaggaggtcaagcagaagaacaagctcaacttcgtgcacgccttc
gtgctcaagagctactcgtacatcgccatcaacaacgacgccaacacgggtctaaaggag
agccagcccaacagcatcctggcgcgcatctgcctagacacggatggtccccgcaggtcc
tcggagagccgcaaactcaccgagtcctacatccaaatgggcattcagtgcggttccaac
gggattatctacaaccggctgctctccatctaccccgcggacatcggagcgcagagcgcg
gcgggcccggagccctacctgttcggggtgttcgcccgggcggggggccagtcggcagtg
tgcgcgttccgcgtggcggatgtggaggagatgatccgccagggccgccgcaactgctcg
aacgggccgaacagcgacgtgcaggtgctggacagcgtcatccagggctctggggccgag
tgcgagcgcaagggggccatcaagcttcaggaggagcagctgaactgtggagccgctcac
ctccagcacccgctggccctgaggaagccactgagggcccgacccatctatgaggcccta
ggcctcagctctattgccgtggacaacgtccacaaccgcaccgttatgttcctggggacc
agcaggggccgactgcgaaagctgtctctgctggctaacctgtctgtggctaatcagtgg
tcactcaaactcgctgcttacgaacccgttcaccacatcatgacctttgaccccagcgac
cacaactacctgtacctgatgaccacacaccatttcctgcgggttcaggtgtcggcgtgt
ggacagtacagctcgtgcaatgagtgtatgagtgccggtgatgcccactgcggctggtgc
acactggacagaaggtgttcggttcagaaggactgctccagcgggactctgagccgctcg
tggatcagcgcaggggacggcatccagcagtgtcctaccatgaccatcacgccctcagag
atcagcatctccgcaaacatgaggaatgtggggatcctgatcaacggcagcatgccggac
ctccagggtctgcaggtggagtgttattacggcacaggaatcgccacaaacgccaccgta
catctggactacggcacagaacagatccagacctgccctctgccaccctctcacatgtat
cccaacatccccttcggcacagatcacgttacagtccctgtggccatcagggttaatggt
gttcctgtggtttctggaagtttcatcatttacgagtgcaaacgaacgggagaaatacac
ctcaaaacagcgtgcacaagctgtctgagtacaccatggcgctgttactgggacccaaag
ctgaatgtgtgtgtttccagcaaagacaacacaccgggtatctttctggagaattccacg
tcctgtcccaggatggtggcctatgatgttcctccactgcccactggaagcactcatgtc
ttcaccctggagctcaagaacatagagcatggcactgagctggactgtgattttggcgat
gggcagctgtatggagcacagtggctggacgggccatcagtgaactgcagtggagtgact
ctgaaaactacaatgtggagcaagatattccatctgaatctgcggagaaaaggaaccggc
acttatatagacagtccaaaggcaatgacagtggcggtctacagctgcagtgcgggcgac
agcgactgctctcagtgccggggccgtcagacgcagggtcacatgtgtgtctggtgtgat
aacagctgtcagcagcaggaccagtgccagaccatcaccacacgctgcccagacccacac
atccacaagatcgagccgctgtctgggccgctcacgggtgggacgctgctcacagtgcag
ggcaggaatctcggacacagcgctgctcagctcaacgtctccatcggcgatgtgccctgc
agcatactgccacaatactacactgtttcagtcaggttggtttgtgagactgctgcatcg
tggaaacagatgagcgatcaggtgacggtgaacgtggccggggacgcagtgggcgtttca
aaggacatcttctcctttgtggagcccaaactactggagttcacaccgaggcagggtccc
ctcgctggaggaaccagactcaccatccatggccagttcctggatgctggatccaccgtt
aacgtcaacatcaacaggactcaaaactgcagcatcttcatgctgtccagcgaagtcatc
aagtgtgtgatgcctccagccgaaccggccgtcgctgataacgtgtcggtgtgtgtggtg
tatgacggccggccgtgcctcagcgcttcacccaacttcacattcacctacgagaaaaac
cctactatcagttacatcaaacccaacaaaagcttcctcagtggtggtcgcagtatatca
gtaactggatacggctttaatctggtgcagtctgtcaggatggaggtgtctggagtcgga
cagacgaactgctcctgtgtgtcgtctactctgatcgtttgtgagtctcctgccgccagt
caatcccagcaggccaccgctcacttttacctcaatgaggtgctgtacagaggagaggat
gcgtctccaatgggacaagggccggacgaggatgaggagcctcacgctgatgtatttcac
tttgactatgtggaggatccacagttctataccgccaacaaagagaaactcatcaaacat
catcctggagagcctctcattctcatcatcaataaagggccaagcgagctggacctgacg
ccgcaggaatactctgtgacgattggctcagatctctgtgacatcaccttccacaacgag
cagcttttccactgcaccatcaacagatccctgagtgccagcaccggagacctgcccgtc
accgtgcatgtgggtaatttccaaaaggtaatagcgatggtgcagatgggtggaggcagt
gagctggccatcgtcgtctccatcgtggtgtgctgtgtgctgctgctgctgtgcactgtg
gcgctggtggtttactgcactaagagccgcagggcagagagatattggcagaagactctc
ttacagatggaggagatggagtcacagatccgtgaggagatacgcaaaggttttgcggag
ctgcagactgatatgacggatctgacgaaagagctgaaccgcacacagggaatccctttc
ctggagtacaagcagttcgtcacacgcacattcttccccaagatgtgctgtgactacgag
aggcgtctggttcagcccatgtatgagaatgatcctcttggcccacgagctctgtctgaa
actcatcctctgctgcaggactggcagtcatctaacagcatgcggcccaacctggaggag
ggaatcacgctgttttccactcttctcaacaacaaacacttcctggtcacctttgttcat
gcactcgagcagcagaaagactttgctgtaagagacaggtgcaatctcgcttctctgctc
actattgccctccatggtaaactggaatactacacgagcatcatgaaggacttgctagtc
gatttgatcgacgcttcagcctccaaaaaccccaaactgatgctccgccgaacagagtca
gtggtggagaagatgctcaccaactggatgtccatctgcatgtacagctaccttaaggag
acggtcggggagccgttcttcctgctgctgtgcgccatcaagcagcagatcaacaagggc
tcgatagacgccatcacaggaaaagcgcgttacacgctcaacgaggagtggcttcttaga
gaaaacattgaagccaaaccgcagaacattaatgtctcattccaagggtacggtatggac
tcggtgagcgtgcgtgtgatgaacacggacaccatctgtcaagtgaaggagaaaatacta
gaggccttttacaagaacctgcccttttcgcagtggcctcgagaagaggatgttgatctg
gagtggtttccagaaggccgcagcagcagaatcctgcaggacctggacgacacatctgtc
atggaggacggcagaaaaaaactcaatactgttttccactatcagatcccagatggagcg
tcactggccatgagcatgaaggacaagagagagaatacactgggcagagttaaagatctg
gacacagaaaaatatgttcatctggtgctgcctcatgatgagctgacagagaacaggaag
taccacagacacagccacaggaagaaggtgttacctgagatctacctgacacgtctgctc
tccaccaagggaaccctgcagaagttcctggacgatctgtttcaggccatcctcagcatt
cctccagagaaaccaccgctagctgtcaaatacttctttgactttctggaagaacaggcg
gacaagcgtggcataaccgacccagacacgttacacatctggaagacgaacagtttgcct
ctgcgcttctgggtcaatatcctgaagaaccctcagtttgtgtttgatatcgataagacg
gatcacatggatgcgtgtctgtctgtcatcgctcaggctttcattgacgcctgctcactc
tctgacctgcagctgggcaaagattctccgaccaataagctgctttatgccaaagagatc
cctgagtataagaagagagtgcagtgttactacaaacagattcaagaaatggcgccgctg
agcgaacaggaaatgaacgctcacctggccgaggagtcacggagatacaggaatgagttc
aacaccaacctggccttagtagaagtctacaagtatgccaagaaatatcgcaatcaggtg
gtgagcgcgctggactcgaacccgacggctcgacgcactcagctgcagcacaagtttgag
caggtgattgcgctgatggaggacaacatttatgagtgcagcagtgaggcctga
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