Garra rufa (doctor fish): 141288270
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Entry
141288270 CDS
T11039
Symbol
kdrl
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04020
Calcium signaling pathway
grf04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141288270 (kdrl)
04020 Calcium signaling pathway
141288270 (kdrl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141288270 (kdrl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
grf01001
]
141288270 (kdrl)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
141288270 (kdrl)
Protein kinases [BR:
grf01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
141288270 (kdrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_VEGFR-1-like_5th
Ig_3
I-set
Pkinase
ig
Ig_2
V-set
VEGFR-2_TMD
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Ig_5
C1-set
Ig_6
Ig_4
V-set_CD47
C2-set_2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
141288270
NCBI-ProteinID:
XP_073676488
LinkDB
All DBs
Position
16:32183811..32238047
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AA seq
1305 aa
AA seq
DB search
MTRLQTSVKGFITFQLLVNFFSSGLVEGSRSPDPQLFPAEDTHLRDVGGTLTLICSGSSS
LRWRLANRNVSSVRIESCEERMHKHCSKLVIHNLVHTDTGFYTCHQKSSDHGVSTYVFVK
DHNNPFVEEHINAEPLYAYREDPFLVVPCRTTSPNQHVTLETMGNSMADHVKSRMKWDPK
RGFKFPLQPYDSYQLITCTTSVDDKQFSTHYMLLRLAVELSNIVIEPERPKVLVGDTLVL
NCSAETSYNGRIEFEWQFQKARINRTHTIKSTRVKHGETFVMSNALSFPNVTMEDKGSYV
CHALLEDKRLHLTTKVAVFEHPFFNVTHNKRKFISTIEGRKVQFEPRVNALPAPDRVLWY
KDGVAISENSTCYETAGYNLTIKQVRQKDAGIFTIALSNQEKGLYRNLSYRLEVRVKPKI
FEEDVAPGGPQTYKYNEGHQLTCTAFGIPMPNITWYWQPCDPSPDLTECKLYTDPLPVGD
VTESHNHYPHNQIKDVSSKIELLKSKNKTISILVVEAANVSGIYFCTAKNELGNRTMRIP
FYVYDQTQPFEVGPSTAVAGDDVTMTCKGTRYLYDRLNWYDSLGRRVPKSETTLQIDPYT
ISLSIKLPNVSRNHTVGYECQALNINSNKVVNATSLLTISERQKPMLTQNLTNQDVNSSS
TLTLTCFAEGVPEPHIEWYKDKTPVSEGPGITLKDSLLIIERVKKDDEGIYECRASNDGG
EAKTSAVITVVGEDGKPNIEVIILVSTGAAATFLWIMLILFIRKLRKPSSADLKTGYLSI
IMDPDQMPLDEQCDRLPYDSNKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKISTCKT
VAVKMLKAGATNNECRALMSELKILIHIGHHLNVVNLLGACTKRGGPLMIIVEYCKYGNL
SNYLRSRRGDFVVYKSQDGKALRSSSGCDLSELIKRRLESVASTGSSASSGFIEDKSYCD
SEEEEEEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKI
CDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGAS
PYPGLHIDEEFCCRLKEGTRMKAPEYSSSEIYQTMLDCWHGEPSKRPTFTELVERLGDLL
QASVQQEGKHYIPINTALLTNTDPSNLSPTERTSSRPVSLRDSGTAWNMKIRPASVKTFD
EVIMENGTNKIHEGGQSDSGIGLSSDDLKTLKRLESLARPRSFMSRAMKSKSKESVLLEG
DKEKYPMLVPSLDLSLEDSSLDPELECHSPPPDYNYVVRYSTPPV
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtcttcaaacctcagtcaaaggcttcatcacttttcagctgcttgttaatttc
ttctctagtgggttggtagaaggatctcgctcgcctgatccacagctgtttcctgccgaa
gacacacaccttcgggatgttggtggcacactcacactcatctgcagtggatcaagttcc
ctgcgctggaggctggctaacagaaatgtgtcatcggtacggattgagtcgtgtgaggag
agaatgcacaagcactgcagcaagctggtcatacacaacttggtgcacaccgacactggc
ttctacacatgccaccaaaagtctagcgatcatggggtatccacatatgtttttgttaaa
gatcacaataatccatttgtggaggaacacattaacgcagaaccgctttatgcatatcgg
gaggatccttttttagtggtcccatgcagaacaacgtccccgaatcaacatgttaccctt
gagacgatgggaaattctatggcagatcatgtaaaaagtaggatgaagtgggatccaaag
agaggtttcaagtttcccttgcaaccttatgacagctaccaactgattacatgtacgacc
agtgtggatgacaaacaattttcaacccactacatgctcctaaggctagcggtggagctg
agtaacattgtcattgaaccagagcgaccaaaagtactggttggggacaccctagtcctc
aactgctctgcagagacctcttacaatggcagaattgaatttgagtggcagttccagaag
gctcggatcaatcgcactcacacaattaaatcgacaagggtcaaacatggtgaaaccttt
gtcatgagtaacgcattaagctttcctaatgtgacaatggaggacaagggctcatatgtg
tgccatgcattactcgaagacaaaaggcttcatctaacaactaaagtcgctgtattcgag
catccgttcttcaatgtgacccataataaacgaaaattcatctctactatagagggtaga
aaggtgcagtttgagccacgggttaatgccttgcccgcaccagacagagtgttgtggtac
aaagacggagttgccatttcagaaaattccacatgttatgagacagccggctacaacctc
accataaaacaagtgaggcagaaggatgctgggatcttcactatcgccctgtcaaaccag
gagaagggtctctacagaaacctcagctacaggctggaagtcagagtgaaaccaaagatc
tttgaggaggacgttgctccagggggcccacaaacttacaaatataatgagggccaccag
ctcacctgcactgcatttggtattcccatgccaaacatcacctggtattggcagccatgt
gaccccagccctgatcttacggagtgtaaactttacacagatcctcttccggttggagac
gtcacagaatcacacaaccattatcctcataatcagattaaggatgtcagcagcaagatt
gaattattaaaaagtaaaaacaagactataagcattctggtggtggaagcagctaatgtg
tcggggatctacttctgtacagcaaagaatgaacttgggaaccggaccatgagaatccca
ttctatgtgtatgaccagacacagccgtttgaggttgggccctcgacagctgttgcagga
gatgacgtcacaatgacctgcaaaggcacaagatacctctacgataggttgaactggtat
gattcacttggccgcagagtgcccaaaagcgaaaccacccttcagatcgacccctacact
atatctttgtctatcaagttgcccaatgtctccagaaaccacacagtgggctatgaatgc
caggctttaaacatcaactccaataaagtggtcaatgcaacttctcttttgactattagt
gagaggcaaaaaccaatgttgacgcagaatctgaccaatcaggatgtgaacagcagcagt
accctaactctgacctgctttgctgagggtgtgccagaaccccatatcgaatggtacaag
gacaagactcctgtctcagagggaccaggtatcactctaaaagatagtcttctgatcatt
gagagggtgaagaaggatgatgagggcatttatgaatgtcgtgccagcaatgacggagga
gaagcaaaaaccagtgcggtcattactgtagtgggagaagacggtaaaccaaatattgag
gtgatcatcttggtgtctactggagcagcagcaacgtttctttggataatgctcatcctc
ttcatccgtaaattaagaaagccaagttcagcagatttaaagacggggtacctgtccatc
atcatggatcccgaccagatgcctcttgatgagcaatgtgatcgtctgccctatgacagc
aacaaatgggagttccccagagaccgtctcagactcggtaaaactttgggccatggagca
tttggaaaagttgtagaggcctctgcatttggcatagacaagatttctacttgcaaaacg
gtggcggtgaaaatgctaaaagctggagctacaaataacgagtgtagagctttaatgtct
gaactgaagattctgatccatattggtcatcatctcaacgtggtcaatcttctaggagcc
tgcacaaagcgtggaggtccactaatgataattgtggaatactgtaagtatggaaacctt
tccaactacttgagaagcaggagaggtgactttgtggtttataagtctcaagacggcaag
gctctgcgttccagctctgggtgtgatctgagcgagctcatcaagcgcaggttggagagc
gtggccagcacaggaagctcagcgagctccggcttcattgaagataagagctactgcgac
tcggaggaagaggaggaagagcaagaggatttgtataagaaagtgctcacactagaagac
ttgatttgctacagcttccaagtggctaaaggcatggaattcttggcttcaagaaaatgt
attcaccgtgatctggctgcacgaaacatcctgttgtctgaaaacaacgttgtgaagatt
tgcgatttcggacttgcaagagatatatacaaggaccccgactatgtccgcaaaggagac
gccagacttcccttaaagtggatggctccagaggcgatatttgacaagatctataccact
cagagtgacgtgtggtctttcggagtgctcatgtgggaaatcttctctcttggtgcctcc
ccttaccctggcttacacattgatgaggaattctgctgccgactgaaggagggcaccagg
atgaaagctcctgaatactcctcctctgaaatatatcaaactatgctggactgctggcat
ggagaaccatccaagaggcctacattcacagagctggtagagaggctaggagatctgcta
caagctagtgtgcagcaggagggaaagcactacatcccaatcaacacggccctgttgacc
aatacagacccctcaaacctgagccccacagagaggacctccagcagacccgtctctctt
agagactccgggacggcttggaacatgaagatccgcccagcgagtgtgaagacctttgat
gaagtaatcatggagaatggaaccaacaagatccacgagggagggcagtcagacagtgga
ataggtctatcttcagatgacctgaagacattgaagcgtctggagtcactggccagaccc
cggagtttcatgtcccgagcgatgaagagcaaaagtaaggagtcagttctgctggagggc
gataaggagaaatacccaatgctggttccctcattggacttgagtctggaggactcctct
cttgacccagagctggaatgtcatagcccacctccagactataactacgtggtccgttac
tccacaccacctgtctga
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integrated database retrieval system
