Garra rufa (doctor fish): 141290139
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Entry
141290139 CDS
T11039
Name
(RefSeq) SLA class II histocompatibility antigen, DQ haplotype D beta chain-like
KO
K06752
MHC class II antigen
Organism
grf Garra rufa (doctor fish)
Pathway
grf04145
Phagosome
grf04514
Cell adhesion molecules
grf04672
Intestinal immune network for IgA production
grf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
141290139
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
141290139
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
141290139
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141290139
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141290139
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141290139
Exosomal proteins of epithelial cells
141290139
Exosomal proteins of breast milk
141290139
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
MLANA
Motif
Other DBs
NCBI-GeneID:
141290139
NCBI-ProteinID:
XP_073678446
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All DBs
Position
17:39123457..39129176
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AA seq
255 aa
AA seq
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MRRRRTLGLGLVLVGFAFCCVSSKDVYVFQDIDGCEFSKEDLSDMVYTVKLVFNQKLLCM
YNSSLGKYVGYDAYGIINADHYNNQSWKMKERKEEVETLCKANARYYIKSETRKVPPVVI
VRSSGKARYGQLSTLECHAFDFYPQAISVTWLLDGSEVTGDVVSTEFMDNGDWSYQMHSY
LELVLHRGVTVSCQVEHSGLEEPLVVYWDSSALDARITKIVVGCSFFFIGLVVALSAVCW
YYKKQHRGFTSLPLH
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaggaggacactcggattgggacttgtcctggtgggctttgctttttgttgt
gtttcgtctaaagatgtttatgtgtttcaggacatcgatggatgtgagtttagcaaagag
gatttgtctgacatggtctacacagtgaagctggtcttcaaccaaaagctcctgtgcatg
tataactcgagtttggggaagtatgttggttatgacgcgtatgggattattaatgctgac
cattacaacaatcagagctggaagatgaaagagcgtaaagaggaggtggaaacactgtgc
aaagctaatgccagatattatatcaaaagtgaaacgagaaaggtgccgcccgttgttatc
gtacgctccagtggtaaggctcgttacggtcagctgagcacgctggagtgccatgcgttc
gatttctatccccaggccatcagtgtcacctggctgctggacggatcagaggtcactggt
gacgtggtctccactgaattcatggataatggagactggagctaccagatgcattcatat
ctggagctggtgctccatagaggagtcacagtgagctgtcaagtggagcacagcggtctg
gaggaacctctcgtcgtttattgggactccagcgctctcgatgccagaatcacaaagata
gttgtgggttgctcttttttctttatcggccttgttgtggctctttctgctgtgtgctgg
tactacaagaaacagcacagaggatttacctctcttcctctgcattga
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