Garra rufa (doctor fish): 141290664
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Entry
141290664 CDS
T11039
Symbol
itchb
Name
(RefSeq) itchy E3 ubiquitin protein ligase b
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04120
Ubiquitin mediated proteolysis
grf04144
Endocytosis
grf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141290664 (itchb)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
141290664 (itchb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141290664 (itchb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141290664 (itchb)
04121 Ubiquitin system [BR:
grf04121
]
141290664 (itchb)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
141290664 (itchb)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
141290664 (itchb)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
HECT type E3
141290664 (itchb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
141290664
NCBI-ProteinID:
XP_073678868
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All DBs
Position
18:complement(39703776..39748376)
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AA seq
821 aa
AA seq
DB search
MACSVAKAGPANGFPMKAQLQITVISAKLKDNKKNWFGPSPYVEVCVDGQSKKTEKCNNT
SSPKWKQSLTVIVTPFSKLIFRVWSHQTLKSDVLLGVATLDVSETLKSHDMKICEVVQTL
QLCADRDQTDSIGDLSVCLDGLQVDPEMFQSAEANNQNTLNGESELNDDSSRSRDPSPSV
SDTQDQPSAPNGRVNGMDSPSGSTRGSRPQRPPRPSRPPPPTPRRPTSSPASSTGSFPDG
SDSSHSDTPVRNPTEGGASDSSPAPTVEQPGRTSLSVVPASNRIPSMVTAGPLPPGWEQR
VDQNGRLYFVDHVEKRTTWERPEPLPTGWERRVDPMGRVYFVDHISRTTTWQRPTMETVR
NYEQWQHQRNQLQGAMQQFNQRFIIGLQDQASATHNKEFDPLGPLPHGWEKRTDSNGRVY
FVHHTTRTTQWEDPRTQGLLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSS
LENGPQITYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSFNAQDLRR
RLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHL
KYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKLVA
EWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLNDWQRSTIYRHY
TSTSKQILWFWQFIKEMDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKE
NWLPRSHTCFNRLDLPPYRSYEQLKEKLMFAIEETEGFGQE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcagtgttgctaaagcaggccctgccaatggcttcccaatgaaagcgcagctg
cagatcacagtgatctcggccaaactcaaggacaacaaaaagaactggttcggcccgagt
ccgtacgtggaggtgtgtgtggacggccagtccaaaaagacggagaaatgcaacaacacc
agttcgcccaaatggaagcagtctctgactgtgatcgtgacgccgttcagcaagctgatc
ttccgtgtttggagtcaccagacgctgaagtcggacgttcttctgggcgtggcgacgctc
gacgtcagcgagacgctcaaatcacatgacatgaagatctgtgaggtggtgcagacgctg
cagctgtgcgcagacagagatcagaccgatagcattggtgatctgtccgtgtgtttggac
ggcctgcaggtggatcccgaaatgttccagtcggctgaggccaacaaccagaatacttta
aatggggaatctgagcttaacgacgactcaagcagaagcagagatccttctccctcagtc
tcagacactcaggatcaaccgtcggctcctaacggccgtgtgaacggaatggactctcct
tcagggtcaaccagagggtcacgaccccagagacccccacgaccctcgcgacctcctccg
ccgaccccacgcagacccacgtcctccccagcttcctctaccggctcgtttcctgacggc
agcgattcgtcccattcagacactccggttcggaatcccacagagggcggagcctctgac
tctagccccgcccccacagtggagcagcctggtaggacatccctcagtgtagtccccgcc
tccaacaggattcccagcatggtcaccgctggacctctgccgcccggctgggagcagcgt
gtcgatcagaacggccgtctctattttgttgatcatgtggaaaagagaacgacgtgggag
agaccggagcctctgccgacgggctgggagcggcgtgtagacccgatgggccgggtgtat
tttgtagaccacattagcagaaccaccacatggcagcggcccacgatggagacggtgcga
aactacgagcaatggcagcaccagcgcaatcagctgcagggagccatgcagcagttcaac
caaagattcatcatcgggctgcaggaccaggcttcggccacccataataaggagtttgac
ccgctgggacctctgccacacggatgggagaagagaacggacagtaatggcagagtttac
tttgttcatcacacgaccagaacgacgcagtgggaggatccgcgcacgcaaggtttgcta
aatgagaagccgctgccggaaggttgggagatgaggtttacggtcgatggcatcccttac
ttcgtagatcacaaccggagaaccaccacttacatcgacccacggactggaaaatcctct
cttgagaatggccctcaaatcacatacgtacgagatttcaaagccaaagttcagtacttc
agattttggtgtcagcaattagcgatgccacagcacataaagatcaccgtcacccggaaa
actttgttcgaagactcgttccagcagatcatgagttttaacgctcaggatcttcggcgc
aggctgtggatcatcttccccggggaggaagggcttgactatggaggcgtggccagggaa
tggttcttcctgttatctcatgaggtgttgaaccccatgtactgcctgtttgaatacgct
ggcaaagataattactgccttcagataaaccccgcctcctacatcaaccccgaccacctc
aaatacttccggttcattggacgcttcatcgccatggccttgtttcatgggaaattcatc
gatacgggcttctcactgccattctacaagcgcatcctgaacaagcccttggctctgaaa
gacctggagtccatcgacccagagttttacaactcactcatctggatcaagctggtggca
gagtggcgtctgtctcgtggtgtcgaggaacagactcaagccttcttcgaaggatttaat
gaggttcttccgcagcagtacctgcagtattttgatgccaaagagctggaggtgatgttg
tgtgggatgcaagaaatagatctgaatgactggcagagaagcaccatttacagacattac
acgtccaccagtaaacagatcctgtggttctggcagtttattaaagagatggacaatgag
aagcgcatgagactcttgcagtttgtcaccggtacctgccgtctgcctgtcggaggcttt
gcagacctgatggggagtaacggacctcagaagttctgcatcgagaaggttgggaaggag
aactggcttccccgcagccatacatgttttaatcgtctggatctgccgccctaccgcagt
tacgaacagctgaaggagaagctgatgttcgccattgaggagacggaaggtttcggacag
gagtga
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