KEGG   Garra rufa (doctor fish): 141290723
Entry
141290723         CDS       T11039                                 
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3-like
  KO
K13646  lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:1.14.11.4 2.4.1.50 2.4.1.66]
Organism
grf  Garra rufa (doctor fish)
Pathway
grf00310  Lysine degradation
grf00514  Other types of O-glycan biosynthesis
grf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:grf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    141290723
  09107 Glycan biosynthesis and metabolism
   00514 Other types of O-glycan biosynthesis
    141290723
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:grf01003]
    141290723
Enzymes [BR:grf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     141290723
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.50  procollagen galactosyltransferase
     141290723
    2.4.1.66  procollagen glucosyltransferase
     141290723
Glycosyltransferases [BR:grf01003]
 O-Glycan biosynthesis
  O-linked Gal type
   141290723
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3 Glycos_transf_2 DUF6492 HK_sensor_dom_bact
Other DBs
NCBI-GeneID: 141290723
NCBI-ProteinID: XP_073678915
LinkDB
Position
18:complement(42734803..42765195)
AA seq 735 aa
MSAMTAVRVILVVILCAVQLCRTEPRSGKSKELLVITAATEVTDGYLRFMRTIRQFNYTV
QVLGLGEEWKGGDVARTVGGGQKVRWLKKELEKHKDKQNTVIMFVDSYDVILASGPEELL
KKFSRFSHRVVFSAEGFCWPDQRLASKYPVVHHGKRYLNSGGFIGYAPDIHAIVQQWKYK
DDDDDQLFYTRIYLDKEQRRKFNITLDHKSLIFQNLNGAIEEVVLKFEKSRVRARNVAYD
TLPVVIHGNGPTKLQLNYLGNYVPTAWTYEHGCGICDEDLLDLSDLSEEEMPLVHVAVFI
EQPTPFLEEFLERLATLNYPHTRLRLFIHNNVVHHEQHVERFWTRHRSLFPGARIVGPEE
NLKQDQARNMAVEACKKDVSCDYFFSIDSDVALINPDVLRILIEENKAVIAPMLSRHGKL
WSNFWGALSPEGFYSRSEDYIDIVQSKRVGLWNVPYITQVYLIRGETLRTRLAAVSLYQQ
EGIDADMSFCKSVRDQGIFMFVSNRDEFGRLVSSSNYNISRLYPDMWQIFDNPVDWKEKY
IHENYSKIFEDNEKVVEQPCPDVYWFPAFSERMCDELVETMEDFGGWSGGKHRDERLAGG
YENVPTVDIHMNQIQYEKEWLKFLKDYIAPVTEKLYPGYYPKAQAVMNFVVRYRPDEQPS
LRPHHDSSTFTINIALNRKNIDYEGGGCRFLRYDCTVESPRKGWSFMHPGRLTHYHEGLP
VTQGTRYIMVSFVDP
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgagcgcgatgactgcggtgcgcgtgattctggtcgtgattctatgcgctgtacagctc
tgccgaaccgaaccgcgttccggaaaatctaaggagctgttggtgatcaccgccgctaca
gaagtgaccgatggctacctgaggtttatgcgcaccatccgacagttcaactacaccgtt
caggttctgggtctgggtgaggagtggaagggtggagatgtcgcccggaccgttggcgga
ggtcagaaggttcgatggctgaagaaagaactagaaaaacacaaagacaaacaaaacact
gtcatcatgtttgtggacagttatgatgtgattttagccagcggtccagaggagctgctc
aagaagttctctcgtttctctcatcgcgtcgttttctccgccgagggcttctgctggccg
gaccagagactggcgtctaaatacccagtagtgcatcacggcaaacgctacctcaactct
ggaggtttcatcggctatgctccggacattcatgccatagtgcagcagtggaagtacaaa
gacgacgatgacgaccagctgttctacacgcgcatctacctggataaagagcaaaggagg
aagttcaacatcacactggaccacaaatccctcatttttcagaatctcaatggagccata
gaggaagtggtcttgaagtttgagaaatccagagtcagagctcggaacgtggcctatgac
acacttcctgtcgttatccatggcaacggaccgactaagctccagctgaattatctgggt
aactatgtgccgacggcgtggacgtacgaacacggatgcggaatctgtgatgaagatttg
ttggacctgagtgatctatctgaggaggagatgccgctggtgcacgtcgctgtgtttatc
gagcagccaactccgtttctggaagaatttctggagagactcgcgactttgaactacccg
cacacacgcttacgactcttcatacacaacaacgttgtgcatcacgagcagcacgtggag
cgtttctggacgcgtcatcgctcgctctttcctggggcgagaattgtcggacctgaggag
aacctcaaacaagaccaggccagaaacatggcagtggaggcgtgtaagaaggacgtttcc
tgcgattatttcttcagcatcgactctgatgttgctctgatcaatccggatgttttgcgg
attctcatcgaagagaacaaggctgtaatcgcgcccatgctgtctcgacacgggaagctg
tggtcgaacttctggggcgctctgagtccggagggcttttactcgcgatcggaggactac
atcgacatcgtccagagcaagagagtcggcttgtggaacgttccctacatcactcaggtc
tatctgatccgcggagagactctacgcacgcgtctggccgccgtttctctctaccagcag
gagggcatcgatgcagacatgagcttctgcaagagcgtccgcgatcagggcatcttcatg
ttcgtgtccaacagagatgagtttggccgtctggtctcctcctcgaattacaacatcagt
cgtctttatccggacatgtggcagatattcgacaacccagtggactggaaggagaaatac
atccatgagaattattccaagatttttgaagacaatgagaaggtcgttgagcagccctgt
ccagacgtctactggttcccagcattctctgagagaatgtgtgatgagcttgttgagacc
atggaggatttcggaggatggtctggaggaaaacacagggatgaacggttagctggaggt
tatgagaacgttcccacagtcgatattcacatgaatcagatccagtatgagaaagagtgg
ctgaagttcctcaaagactacattgctcctgtgacagagaaactctacccaggatactat
ccgaaggctcaggctgtgatgaattttgtggttcgctaccgtcctgatgagcaaccgtcg
ctccgtccgcatcacgattcctccacgttcaccatcaacattgccctcaacagaaaaaac
attgattatgagggtggaggttgtcggtttctgcgttatgactgtacggtggagtctccc
aggaagggctggtcgttcatgcatccgggccggttgacgcattatcacgaggggcttccc
gttacgcaaggaacacgatacatcatggtttcgttcgttgacccttga

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