Garra rufa (doctor fish): 141292181
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Entry
141292181 CDS
T11039
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf04110
Cell cycle
grf04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141292181 (rb1)
04218 Cellular senescence
141292181 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
grf01009
]
141292181 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141292181 (rb1)
Protein phosphatases and associated proteins [BR:
grf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141292181 (rb1)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
141292181 (rb1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
TetR_C_15
Motif
Other DBs
NCBI-GeneID:
141292181
NCBI-ProteinID:
XP_073680235
LinkDB
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Position
19:23411144..23451256
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AA seq
903 aa
AA seq
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MPPKKRNSGTPQKKEFKGNTKNGSPDSSENAVLSPERHKDKEPDFVSLSEELQATNPICD
HAWRIWEREIRSMDKANMPYSNRQQWGTCLFIAGMELDGIGLTFTQFLKVVGLSVKQFIS
LVRKMDVNVDTISPKVNAALKRLENKYDVTLALYQRFVKTCEKISAEPDKAKRTELWESS
WTMFLLAKGTFLQMEDDLVIAFQLMLCVLEFFTKRFTLSLLQSPYKSAVSSSTLSPPTRT
SRRNQGKAKPRPPEMDVQLLETLCKESDCSVDEVKNVYQTTFCAFLDSVGLSGLQGLPPM
ETLSKQYEDLYHKNKDFDARLFLVDDETLSPNKIEVSKVEMTPRKNLPGDDVAIPVPQTP
IRAAMNSIQQLRVDLTSASDQPSNNLLVYYKNCTVDPSEEIRKRVEELGQVFIKRFAQAV
GQHCEGLGRKRFNLGAQLYYKVMESMLKLEEKRLSVQNFSKLLNNATFHTSLLACALEVV
MATYVGNSLRSGGFGRSSGASDSVETDLCFPWILDIFQLPAFDFYKVIESFIKAEPTLKH
DMMKHLEQCEHVIMESLAWKADSPLFDLLKQSCEEGPGEQAEPPATLNQPLHHNHTAADL
YLSPVRPSRQPPATEAELPTPGTKALRSNSLSLFYKKLYRMAYLRLKTLFSHLLTSHPEL
EPIIWTLLQHTLQNEYELMRDRHLDQLIMSAMYAICKVKNVDLRFKTIVTAYKEMPNTNQ
ETFKRVLIREGQYDSIIVFYNLVFMQKLKTNILQYSSPRPPPLSPIPRIPCSPYKNSPLR
VPGSNNVYVSPLKSSRMSPLVMTPRSRILISIGESFGSADKFQKINEMVSSTDWSLKRSL
DGGSAPKPLKRLRFDMDGQDEADGSKSSGESTLIQKLAEMSSTRTRMQEQKLKEESVKEH
PEP
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaagaagcgtaacagcgggaccccgcagaagaaagagttcaaagggaacacg
aagaacggatctccggacagcagcgagaacgcagtgctgagccccgaacgacacaaggac
aaggagcctgacttcgtgtctctcagtgaggagcttcaggccaccaatcccatctgtgat
catgcgtggagaatttgggagagggagatcaggtcgatggacaaggcaaatatgccgtat
tcaaacagacagcagtgggggacatgtctgttcatcgcaggcatggagcttgatggcatc
ggcctcaccttcacacagtttctgaaagtagttggactcagtgtgaagcagttcatcagt
cttgtgaggaagatggatgtaaacgtggacacgataagccctaaagtgaatgctgctttg
aaacgactggagaacaaatacgatgtgacactggctctctaccaaagatttgtgaagact
tgtgaaaaaatctcggcagagcctgacaaagcaaagagaacagagctttgggaaagcagc
tggaccatgttcctcttggccaagggaacatttctgcagatggaggatgaccttgtgata
gccttccaattgatgctgtgtgttctggagttcttcactaagcgtttcactctttctctg
cttcagtcaccctacaagtcagcggttagttcatccaccttgagtcctccgaccaggaca
tctcggcgtaatcaaggcaaagccaaaccccgtcctccagagatggatgtgcagttactg
gaaacactctgcaaggaaagcgactgcagtgtagatgaggtgaaaaacgtgtaccagacc
actttctgtgcattcctggactctgtgggtctgtcaggactccaagggcttcctccaatg
gaaacactttccaagcaatatgaagacctgtaccacaaaaacaaggactttgatgccagg
ttgttcttggtggatgatgagacgctttcccccaacaaaatagaagtgtcaaaggtggaa
atgactccaaggaaaaatctgcctggagatgatgttgcaattccagttccacagacccca
atcagggctgcaatgaactccatacagcagctcagggttgatctcacctcagccagtgac
cagccctcaaacaatctcctagtctattacaagaactgcactgttgatccatctgaagag
atcagaaagagggttgaagagctgggtcaggtcttcatcaagaggtttgctcaggctgtg
ggccagcactgtgaggggctgggcagaaagcggtttaatcttggtgcccaactctactac
aaggtcatggagtccatgctaaaattggaggagaagagattatctgtccaaaacttcagt
aaactcctcaacaatgcaacattccatacctcattgcttgcatgtgccctggaagtagtt
atggcaacctatgttgggaactccttaaggagtggaggttttggccgtagctcaggggcc
agcgattctgtcgaaactgatctgtgcttcccctggatcttggacatcttccagctgcct
gctttcgacttctacaaggtgatagagagctttattaaagctgagcccaccctgaaacac
gacatgatgaagcacctggagcagtgcgaacatgttatcatggagagtctcgcatggaaa
gcggactctcctctctttgacctccttaaacagtcttgcgaggaaggacctggggaacaa
gcagagccacctgcgacactaaaccaacccctccatcacaaccacactgctgctgacttg
tatctctctcctgtgcggccgagccgtcaacccccagcaacggaggccgagctccccaca
ccaggcaccaaagcactccgttcaaactctctgagcctcttctacaaaaaattatacagg
atggcctatctgcgactgaaaacactgttctcgcacctgctgacctcacacccagaactg
gagccaataatatggaccttgcttcagcacaccctccagaacgagtatgaattaatgcga
gacagacacttagaccagttgattatgtctgctatgtatgccatatgcaaggtgaaaaac
gtggacttgcgcttcaaaacaattgtgactgcttacaaagagatgccaaatactaatcag
gagacatttaagcgtgtgcttatcagagagggtcagtacgactctatcattgtcttctac
aacctggtcttcatgcagaagcttaagactaacatccttcagtattcctctcctcggccg
ccgcctctgtctcccattccccgtatcccctgcagcccctataaaaactctcctctgcgg
gtgcctggtagcaataacgtctacgtctcccctttgaaaagcagccgtatgtctccattg
gtcatgaccccacggagcagaattcttatatctatcggcgaatcctttgggtctgcagac
aagtttcagaagattaatgagatggtgagcagcaccgattggtctctcaagaggagtctg
gatggaggctccgcccccaaacccctgaagagattacgctttgacatggatggacaagat
gaagcggacggaagcaaatcaagtggcgagtcaacgctgatccagaagctggctgagatg
agctcgacacgtactcgtatgcaggaacagaaactaaaggaggagtccgttaaagagcat
ccagagccctaa
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