Garra rufa (doctor fish): 141293655
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Entry
141293655 CDS
T11039
Symbol
sp1
Name
(RefSeq) transcription factor Sp1 isoform X1
KO
K04684
transcription factor Sp1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04137
Mitophagy - animal
grf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
141293655 (sp1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
141293655 (sp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141293655 (sp1)
03029 Mitochondrial biogenesis [BR:
grf03029
]
141293655 (sp1)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
141293655 (sp1)
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
141293655 (sp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
141293655
NCBI-ProteinID:
XP_073681792
LinkDB
All DBs
Position
20:complement(31869432..31911127)
Genome browser
AA seq
682 aa
AA seq
DB search
MSDLKKREKLAPSHIMSDQQQNEMAALVDNDTSFIQKRNSSTTQDSQQPSPLALLAATCS
RIDENDAVEQSRQSQMQDAQIDLHQSHLSQATNGWHVIPAGVPVSTSSGTCPTTTSEDKS
RQTVSTGGVVQQQYVMASSQNLQSQQVLTTLSGVMPNIQYQVIPQFQTVDGQQLQFAQTA
QEMSATASGQFQLVSSPNGNQQLIAAPTNRAAGAGNILTVPGLFQQAIPLQNISLGGTML
PNQTQFLTNMPVPLNANITLLPVGSAATVGSVSDANAGGTLGTSQQLLQTTASTSATEYC
TTSTSTRTAASGGVVTLTQSNKGETGKPFQNMSGASDNRDGQKQQCQAQILIQPQQVLQT
VQPGSVSAGGQMYATQTLSQDGVQNVQIQTIANGSPILIRTVGPNGQVSWQTLQLQSPAN
TQITLAQPGTTGTVQLSGLQTINLNTLGNAGLQMHQLQGVPITIANTTGVCSAGEVSGAA
ADGLDDSGVMDENVESSPTPTSRRTRREACTCPYCKDGEGRNDPSKKKQHICHIPGCGKV
YGKTSHLRAHLRWHTGERPFVCSWSFCGKRFTRSDELQRHKRTHTGEKKFSCPECPKRFM
RSDHLSKHIKTHLNKKGSAGPVSNTDNTVSTATATDSNTTPDQQTLVTMDPSSEGFARLA
SSGISVLQVTDLHSINLNSNGY
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttaaagaagcgtgaaaaactcgcgccttcacacattatgagcgatcaacag
cagaatgaaatggccgcgctggtggacaacgacacgagcttcattcagaagagaaactcc
agcacaactcaagactcgcagcagccgtcacctttagcgttgttggcagccacatgcagt
cggattgatgaaaacgacgcggtagaacagtcacggcaaagccagatgcaggacgcacag
attgacctccatcagtcccatctgtcacaagccaccaacggctggcacgtcatacctgca
ggagttccggtgtccaccagctccggtacctgtcccacgacgacctctgaggacaaaagc
agacagacagtgtccacaggaggcgtggtgcagcagcagtacgtgatggcgtcctcacaa
aacctacaaagtcaacaggtgctcactaccctctctggtgtgatgccaaatattcaatat
caggtaatcccacagtttcagaccgtagatggacagcagcttcagtttgctcagacagcc
caggagatgtcagccacagcatcgggccagtttcagctggtgtcttcgcccaacggtaat
cagcagctcatcgctgcccccaccaacagagctgccggtgctggcaacattttaactgtc
cctggccttttccagcaagcaatccctctgcaaaacatcagtctgggtggtacaatgctg
cccaatcagacacagttccttaccaacatgcctgtaccactgaatgctaacatcaccctt
ctcccagtgggctctgctgccactgttggatctgtaagcgatgcaaacgctggaggaact
ttaggaacttctcaacagctgctccagaccacagcgtctacaagtgcaacggagtattgc
actacttctaccagcacacggacggctgcatcaggtggtgttgtaacactaacccagagt
aacaaaggagagactggaaagcccttccagaacatgtccggagcgtctgataatagagac
ggacagaaacaacagtgtcaagctcagattctcattcagccacagcaggtcctgcagacc
gtccagcctggctctgtctcagccggtggtcagatgtatgcaacacagaccctttctcag
gatggagtgcagaatgttcagatccagaccattgccaatggcagccccatcctgatccgt
accgtaggtccgaatggccaggtaagctggcagacccttcagttgcagagccccgctaac
acccagatcacactggcacagcccgggacgacgggaaccgtacagctctctggtcttcag
accatcaacttgaatacgcttggcaatgcagggttgcagatgcatcagctgcagggtgtt
ccgatcaccatcgccaacacaacaggtgtttgttctgcaggtgaggtgagcggggcagct
gcagacggtctggatgacagcggtgtgatggatgagaatgtggagagcagtccgacaccc
accagcagacgcacacgcagggaagcttgtacctgcccttactgcaaagatggagaggga
cgcaatgaccctagtaagaagaaacagcacatctgtcatattcccggatgcggcaaggtc
tatgggaagacgtctcatctgcgggcacacttacgctggcacacaggagagaggcccttc
gtttgctcctggtccttctgcggtaaacgtttcacacgatctgatgagctgcagcgacac
aagaggacacacacaggtgaaaagaagttctcatgcccagagtgtcccaaacgtttcatg
cgtagtgaccacttgtccaaacacatcaagacccatttgaataagaaaggatctgctggg
cctgtgagcaacaccgataacaccgtcagcactgcaaccgccaccgacagcaacacgaca
cctgatcagcagactctagtaactatggacccctcatccgaagggtttgcgcgtttggcg
tccagcggcatcagtgtcttgcaagtcacagatctgcactccattaatctgaatagcaat
ggctattaa
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