Garra rufa (doctor fish): 141295554
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Entry
141295554 CDS
T11039
Symbol
xdh
Name
(RefSeq) xanthine dehydrogenase/oxidase isoform X1
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00230
Purine metabolism
grf00232
Caffeine metabolism
grf00983
Drug metabolism - other enzymes
grf01100
Metabolic pathways
grf01232
Nucleotide metabolism
grf04146
Peroxisome
Module
grf_M00546
Purine degradation, xanthine => urea
grf_M00958
Adenine ribonucleotide degradation, AMP => Urate
grf_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
141295554 (xdh)
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
141295554 (xdh)
09111 Xenobiotics biodegradation and metabolism
00983 Drug metabolism - other enzymes
141295554 (xdh)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141295554 (xdh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141295554 (xdh)
Enzymes [BR:
grf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
141295554 (xdh)
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
141295554 (xdh)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of breast milk
141295554 (xdh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Ald_Xan_dh_C
CO_deh_flav_C
Fer2_2
Fer2
MinC_C
Motif
Other DBs
NCBI-GeneID:
141295554
NCBI-ProteinID:
XP_073682885
LinkDB
All DBs
Position
21:complement(36116405..36140633)
Genome browser
AA seq
1353 aa
AA seq
DB search
MSFIMEETKNKLKSPGDDLVFFVNGKKITEKNAEPEKTLLTYLRRSLGLTGTKLGCAEGG
CGACTVMVSKYHPHQNQIIHYAVNACLAPLCSLHHCAVTTVEGIGSVASKLHPVQERIAK
AHGSQCGFCTPGIVMSMYALLRNNPQPNMHDIQEAFQGNLCRCTGYRPILEGYRTFAKDG
GCCGGKGQTNGCCMTNGHVQEHVSDNSTLPAEKLYDQSEFMPLDPTQEIIFPPELMSLSK
QPQRKLRFVGERVLWIQPCSLEELLELKATYPNAKLVVGNTEVGIEMKFKKLLYPVILAP
AYIPELNTIQHTQDGIQVGASVTLTVLGDVLHAAVKKLPAHQTEVFKAVLEQLRWFAGQQ
IRNVAAVGGNIMTASPISDLNPVFMAAGCKLTVMSKGEKRVLEMDDKFFPGYRKTILKPE
EILLSIEIPYTRKGQYFSAFKQSPRKEDDIAIVTCGMNVLFKEQSNTVQSIRISYGGMAP
VTVLATATCNRLLNRQWNKELLEEACASLAEEMILSPSAPGGMVTYRRTLTISFFYKFFL
TVQHKLALDLQMEGLTVEDVRPECATATELFQLDSPSSVQLYQAVPAGHNSEDVVGQPIM
HLSALKQATGEAIYCDDIPCYENELHLALVTSTKAHALIKSIDTSDAMAVPGVVAFVSAR
DIPGSNMTGPVVYDETVFADDKVTCVGHIVGAIVADTQAHAQRAAKAVKISYEELQPVIV
TIQDAIANKSFFQPVRSIERGEVAQGFKDSDHILHGEMHIGGQEQFYLETNCTLAVPRGE
DGEMELFVSTQSASKTQALVAKALGVPANRVVCRVKRMGGGFGGKESRSTILSTVVAVAA
HTVKRPVRCMLDRDEDMLVTGGRHPFFGHYKVGYMNDGRVMALDVTLYSNAGNSLDLSLS
ILERALFHMDNSYNIPNIRGTGYMCKTNLPSNSAFRGFGGPQGMMIAESWMSDVALSCGL
PAEEVRRMNMYKEGDFTPFNQCLDQFTIDRCWEECLQLSEFKKRKDAVEQYNRQHRWTKR
GLSIIPTKFGISFTAVFLNQAGALVLVYSDGSVLLTHGGTEMGQGLHTKMVQVASKTLGI
PCSKIHITETSTNTVPNTSPTAASASSDLNGMAVYNACQTLLQRLQPYKDKNPKGCWEDW
VNAAYFDRVNLSANGFYKTPDLGYDFDSNSGRPFNYFSYGVAVSEVEIDCLTGSHKNLHT
SIVMDVGKSLNPALDIGQVEGGFMQGLGLFTLEELRYSPDGYLYTRGPGMYKIPAFGDIP
IELKVSLLRDAPNDKAIFSSKAVGEPPLFLAASVFYAIKDAITAARAESGLTGPFRLDSP
ATPERIRNACEDKFTKMCPPADPGTFTPWAVQV
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcataatggaagagactaaaaacaaacttaagtctccaggagatgaccttgtt
ttcttcgttaatggaaaaaagatcactgagaagaatgctgagcctgagaaaaccctcttg
acatatctgaggagaagcttgggtctgacgggaaccaaactgggatgtgctgaaggaggt
tgtggagcctgcactgtaatggtgtccaaatatcatccacatcaaaaccagatcattcac
tatgcggttaatgcttgtctggctcctttatgctctttgcatcactgtgcagtaacaacc
gtggagggcatcggcagtgtggccagcaaactccatccagtacaggagcgaattgcaaag
gctcatgggtcacagtgtgggttctgcacaccaggaattgtgatgtctatgtatgctctt
ttgagaaacaaccctcaacccaacatgcatgacattcaggaggcctttcaaggcaattta
tgtcgctgtactgggtacagacctattctagaaggctacagaacattcgcaaaggatggg
gggtgttgtggtggaaaagggcaaactaatggctgctgcatgactaatggacacgtacaa
gagcatgtcagtgacaattcaacgcttccagctgagaaattgtatgaccaatcagagttt
atgccactggatccaacacaagagattattttcccgcctgagctcatgagtctaagtaaa
cagccccagagaaagttaaggtttgtgggggaacgagtactttggattcaaccctgctct
ctcgaagaactcttggagctgaaggcaacctatccgaacgctaaactagtggttggaaac
acagaagttggtattgagatgaagttcaaaaagcttctgtaccctgtgattctggcacca
gcttacatccctgaactgaacaccatccaacacactcaggatggtattcaggttggtgca
tcagtgacattgactgtcctgggggatgtgttgcatgcagcggtgaagaagctgcccgct
catcagacggaggtctttaaggctgttcttgagcagctgcgttggtttgcaggacagcag
attcgaaatgttgcggctgttggtggcaatattatgacagcgagtcccatttcagacctc
aaccctgtgtttatggcagcgggctgcaagctgacggtgatgtccaaaggggagaaacgt
gttcttgaaatggatgacaagttcttccctggttataggaagaccattttgaagccagag
gagattctgttgtccattgagattccatacacaagaaagggccagtacttttcagctttc
aaacagtcccctcgtaaagaggatgacattgccattgtcacatgcgggatgaatgtattg
ttcaaggagcaatccaatacagtgcagagtatccggataagctatggaggaatggcgcct
gtcactgtccttgccactgcaacatgcaacaggttactcaacaggcaatggaacaaagag
cttctagaggaagcttgcgcctcattagctgaggagatgattctgtcaccttcagctcct
ggtgggatggtgacatacagacgcacactgacaatcagcttcttttacaagttcttcctc
actgtccagcacaaactggctctggacttgcagatggagggtttgactgtggaagatgtc
cgacctgaatgtgctactgctactgagctcttccagttggactcaccgtccagtgtacaa
ctctaccaggcagttcccgctggtcataatagtgaagacgtcgtggggcagccgatcatg
cacctctctgcacttaagcaggccacaggagaagctatctactgtgacgacatcccctgt
tatgaaaacgagcttcatttggctttggtcaccagcactaaagctcacgcactcataaaa
tccattgacacctctgatgcaatggcagttcctggagtggttgcatttgtctctgctaga
gacatccctggaagtaacatgacagggcctgttgtttatgacgagaccgtttttgcagat
gataaggtcacatgtgttggacatatagtgggggccattgtggcagacacacaggcccat
gctcagagagcagccaaagcagtgaagatcagctatgaggaactgcagcctgtaattgtc
accattcaggacgcaattgccaacaagtccttctttcagccagtgagaagtatagagaga
ggagaagttgcacaaggattcaaagactctgatcacattctgcacggtgagatgcacatt
ggaggacaggaacagttttatctggagactaattgcacgctggcggtccctcgtggagag
gatggagaaatggagctgtttgtgtccacacagtcagcctccaagactcaagcccttgtg
gctaaagctctaggagtgcctgccaatcgggtggtgtgtcgtgtaaagaggatgggagga
ggatttggagggaaagaaagtcggagcaccattctgtccacagtggttgctgttgccgca
catacggtcaaacggccagttcgctgcatgctagatcgtgatgaggacatgctggtcaca
ggtggtcggcatccattctttggacactacaaggttgggtacatgaatgatggaagagtg
atggcacttgatgtgacgctttacagcaatgctggcaattcactggacctgtcattgtca
atcctggagagggcactattccacatggataattcctacaacattcctaacattcgtggc
acaggctacatgtgtaaaaccaacctgccgtctaactcagcattcagaggctttggtgga
ccccagggcatgatgatcgcagagagctggatgagtgacgtggctttgagctgtggtctg
cctgctgaagaggtgaggaggatgaacatgtataaggagggggatttcacacccttcaat
caatgtctagaccagttcaccattgatcgctgctgggaggaatgcttgcagctctcagaa
tttaaaaagcgcaaggatgcagtggaacaatacaacaggcagcatcgttggaccaaaaga
gggctgtccatcattcccaccaagtttggcatcagcttcactgctgtcttcctcaaccag
gctggagcattggtacttgtgtactcagatggttcggttttactaactcatggtggaaca
gaaatggggcaaggcctgcacactaaaatggtccaggtggccagtaaaactcttggaatc
ccctgctcaaagattcacatcacagagaccagcactaacacagttcccaacactagtcct
acggccgcctccgcctcctctgaccttaacggcatggccgtctataatgcttgccagaca
ttactacagagacttcagccttacaaagacaaaaaccccaaaggctgctgggaggattgg
gtgaatgcagcatatttcgacagagtcaatttgtctgccaatggattttacaagactcca
gatcttggctatgattttgactcaaattcaggaaggccatttaactacttcagttatggc
gtggctgtctcagaggtggagatagactgtctaactggcagtcataagaatcttcataca
tctatagtcatggatgtgggcaagagtttaaatccagcattggacattggacaggtggag
ggtggtttcatgcaaggtttaggcctgttcacactggaggagctacgctactctccagat
ggttacttgtacactcgaggacctggaatgtataagattcccgcttttggggatattccc
attgaactaaaggtctcgctgctcagagacgctcctaatgataaagccatcttctcgtca
aaggctgtgggcgagcctcctctctttctggcggcttcggtgttttatgccatcaaagat
gccatcacagctgccagggctgagtctggcctgactggacccttcagactggacagccct
gccacacctgaacggatacgaaatgcctgtgaagacaagtttactaaaatgtgtcctcct
gcggatcctggcacctttaccccatgggcagtgcaggtgtaa
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