Garra rufa (doctor fish): 141297697
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Entry
141297697 CDS
T11039
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00514
Other types of O-glycan biosynthesis
grf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
141297697
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
141297697
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141297697
Enzymes [BR:
grf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
141297697
Glycosyltransferases [BR:
grf01003
]
Glycan extension
O-Glycan
141297697
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
141297697
NCBI-ProteinID:
XP_073684247
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All DBs
Position
22:1108095..1136111
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AA seq
380 aa
AA seq
DB search
MHLSHVGTNKTCFLLSLAFCALLVLLIPSLQPPQRQTDLPQPRPRAKPAGAGAGRRRDLY
GNPGQGSGDAKDGRFIHPLPPAERPEDQPRMLEGDAARASSPGARSKDSLELRDIFIAVK
TTRKYHKSRLQLLSQTWVSRAKEQTFIFTDIEDKDLRQKAGLNIINTNCSAAHTRQALCC
KMSVEYDKFIESQKKWFCHMDDDNYVILSSLLELLSSYSHTQDVYLGRPSLDHPIEAAER
VKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFITTAEKIRLPDDCTIGYIIEA
LLEVPLTHTGLFHSHLENLQRLPTDNILQQVTLSYGGFENRRNVVNVGGAFSLAEDPTRF
KTLHCLLYPETEWCPRKSRH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatcccatgtcggcaccaacaaaacctgcttcctgctttccctggcgttctgc
gccctactggtgctcctcatcccctccttacaacctcctcagcgtcagacggatctgccc
caacccaggccccgtgccaagcccgccggagccggagccggacgcaggcgtgacctttac
gggaaccccggccaaggaagcggcgatgccaaggacggccgtttcattcacccgcttcct
cccgcagagcgacccgaggaccagccgaggatgttggagggagacgctgcacgcgccagc
tcccctggggcccggtccaaagactctttggagttgagagacatttttattgccgttaag
accaccaggaaatatcacaagtccagactgcagctcctgtcccagacatgggtgtccaga
gccaaggaacagacgtttatcttcactgatatagaggataaagatctcagacagaaagca
gggctgaacatcatcaacaccaactgctctgcggctcatacgcgtcaggccttgtgctgc
aagatgtctgtggagtatgacaagttcatcgagtcacagaaaaagtggttctgtcacatg
gatgatgataactacgtgatcctgtccagtttgctggagctgctgtcgtcctattctcac
acacaggatgtgtatctgggcagacccagtctggatcatcccatagaggccgctgagagg
gtcaagagcgacggatcggtctcagtcaagttctggttcgccaccggaggagctggattc
tgcatcagccgaggtttagctctcaagatgagtccatgggcgagtcttggaaacttcatt
acgactgcggagaagatccggctcccggacgactgtacgatcggttatatcatcgaggct
ctgctggaggttcctctgactcacacaggcctgttccactcacacctggagaacctgcag
agactccccacagacaacatactccagcaggtgaccctcagttatggtggatttgagaac
aggaggaatgtggtcaatgttggaggagcgttctcattggctgaagatccgacacggttt
aaaacgcttcactgcctgctctatccagaaacagagtggtgcccacgcaagagtcgtcac
tga
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