Garra rufa (doctor fish): 141298200
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Entry
141298200 CDS
T11039
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04140
Autophagy - animal
grf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141298200 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141298200 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141298200 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141298200 (plekhm1)
Membrane trafficking [BR:
grf04131
]
SNARE
SNARE associated proteins
Others
141298200 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
141298200 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
141298200
NCBI-ProteinID:
XP_073684812
LinkDB
All DBs
Position
22:6866646..6896421
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AA seq
1059 aa
AA seq
DB search
MLATQTPESGPEARDVKQWIKGKIARTLKALQKRYITTDTAVTSEDLEANLLCCALEAVF
IHGIKSKFIRFDGNHTRKGGSRGALPQPVFWSLLKTVTHRDVVQELERLSFINSDIGRCR
AWVRLALNDGLLECYLTSLFRDGSNLSSYYQPGAILLDPEDREVLLTLLQGLSSMTFQLS
YKSAVLNEWTNTPLVLSGLCPPTPADEHLEGPKRKESWDTVSQSSAGSGSSDWAQEVHQR
EPRREQNEGNAPLTSSNLSLDTSGSSQLSSSLSSDSLLQGQEPRSPEKEHWSCDTEISQN
AQQKIIVTEEKRSSTQDLKEDFNVFIRASDSAAQAVNDNTHIPDMCPTAAQDTRQSDADI
LEESKACSEKISADTLQEMEEGTAEESKTLDETSTVTETPECEQKKENRDSSVDSPSTET
VEKTSDLKDPFTLLPETSTASKSVEQSQHAACRRSASTVCRKTSTDSSYSSCKSTSWISE
DDFYKPEEMSSSEAYAVIDIAQMNGQVTPTSEPDTVQTPTSVVHRRHNGLPNPFRGLLKL
GQLERRSAVGMWRDYYCELSPFELRLYMNAEERICYENLSLLRCEDVHLSSGTEGRFRLS
FTGKRIYLRAPSGGEAEDWVDRIVEAISKLRPMMRDEQWEVLHTSNDQDVPSPTPSSPEH
TISELPDTPQLDWIRHKDPEPDAIKEAVVYQNLEKGWRSVLLSLSLEALRGYQVQGESKT
PLFSHPIGNIRDVVPDVSLGSPAFFKVLTAQGTLTLRAESGEEARGWRSLIRGALDSYLE
TEDDGAVQGVSSPTGGYVGSVHKLVQHRLKGDGVLLSHLCIVPNEKGLDAQNYKCAGCPR
QIGLSLGRARLCEFSGQYYCESCHQGDTIIIPSRMVHNWDLTAREVSKQAFKLLTQIEHE
PLLHLDVLNPNLFDHTDIMDKVQNLRQRLRFLGDYILSCRSGIGKRIQPRLQQRTYLLDN
SDVYSVLDLQQIADEHYESYLQSLIQFGSKHVHNCDLCTQRGFICQICNTDDIIFPFQFD
STTRCPVCKTVFHSACKATCSVCPRCVRIQKYMERDLED
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgttggccacccaaacacctgagagtggcccagaggctagagatgttaaacagtggatc
aagggaaagatcgcacgaactctaaaagccctacagaagcgttacatcaccacagacact
gcggtcaccagcgaggacctggaggctaacctgctgtgttgtgctttggaggcggtcttc
atccatggaatcaagagcaagttcatccggtttgacggaaatcacacacgtaaaggaggg
tcacgaggagcacttcctcagcccgtcttctggagcctgttgaagactgtcacccacagg
gatgtagttcaagaactggaacgactaagcttcataaactcagacattggccgctgcaga
gcatgggttcgtctggcgctaaacgacggccttctggaatgttacctgacctcgctgttt
cgtgacgggtccaacttgagctcctactaccagcccggggctattttgctggacccggaa
gaccgtgaggttctcctcacccttttgcagggtttgtcctcgatgaccttccagctctcc
tataaatcagctgtgctgaatgagtggaccaacacaccgctggtcctctctggtctttgt
cccccaactcctgccgatgagcatcttgaaggccccaagcgcaaggagtcttgggatacg
gtctcccagtcatccgcagggtctggaagctcagattgggctcaggaggtgcaccagagg
gagccgaggagagaacagaacgaggggaacgcaccgcttacctcgtcaaacctgagtctg
gatacatcgggatcgtcacagctgtcctccagcctgagctctgatagtctgctgcaggga
caggagcccaggagtccagaaaaggagcactggagctgtgacacagagatcagccaaaac
gcacaacagaagatcatcgttacagaagagaaacgttcctctactcaggacttgaaggaa
gactttaatgtgtttatacgagcttcagactctgctgcacaagctgttaatgacaacacg
cacatacctgacatgtgtccaacagctgcacaggacacacgtcaatcggatgcagacatc
ttagaagaatctaaagcatgctcagaaaagatatcagctgatacattacaggagatggaa
gaaggaacggcggaagaatccaagactctagatgaaaccagcacagtcactgagactcca
gaatgtgagcagaaaaaagagaacagagactcatctgttgattccccttcgaccgagact
gttgagaagacctctgaccttaaagaccctttcacgcttcttccagagacctctactgcc
tctaaatcagtggagcaatcccaacatgctgcatgcagacgctccgcaagtaccgtctgc
agaaaaacctccacagactcttcgtattcctcctgcaaatctacatcttggatatcagag
gatgatttctacaaaccagaagaaatgagcagttctgaagcatatgccgtcattgacatc
gcgcagatgaacggacaggtgacgcctacctctgaaccggacactgtccagacaccaact
agtgtagtgcaccggagacacaacggtcttcctaacccgttcaggggtctgctgaagctg
ggtcagctggagaggcgtagtgcggtaggcatgtggagggactattactgcgagctctct
ccgtttgaactccggctttacatgaatgcagaggagcgaatctgctatgagaacctgtcc
ctgctgcgctgcgaagatgtccacctgtcatccggtaccgaaggccgattccggctctcc
ttcacaggcaaaagaatctacctgcgtgcaccatctggaggagaagcagaagactgggtg
gatcgcatcgtggaggccatcagcaaactacggcccatgatgagagacgaacagtgggag
gtgctacacacgtccaacgaccaggacgtcccgtcgccgacaccttcgagccccgaacac
accatctcagagcttccagataccccacagttagattggattcgtcataaggacccagaa
ccagacgccataaaggaagcggtagtctatcagaatttggagaagggttggcggtctgtt
ttattgtctctgtctttggaggccctcagagggtaccaggttcaaggggagtctaagacg
cctctcttctcacatcccattgggaacatcagggatgtggttcctgatgtttctctagga
agtcctgcgttttttaaggttctgactgcgcagggcactctgacgctgagggcggagagc
ggcgaggaagcgcgaggatggaggagtctgattagaggagcactcgactcgtatctggag
acggaggatgatggagcggttcagggcgtctcatcacccaccggaggttacgtggggagt
gtccacaagctggtccaacacagactgaagggagatggtgtgttgctgtctcacttgtgt
atagtcccgaatgagaaaggactagacgcacaaaactacaaatgtgcaggttgccctcgt
cagatcggcttgtctctggggagagccagactctgtgagttctcaggtcagtactactgt
gagagctgccatcagggagacacaatcatcatcccctcccgcatggtgcacaactgggac
ctgacagcacgtgaggtctcaaaacaagcctttaagttactgactcagatcgagcacgag
ccgctcctgcatcttgacgttttgaatcctaacttgtttgatcacactgacatcatggac
aaagtgcagaacctcagacagaggcttcgtttccttggagattatatcctcagctgccgc
agcggcatcggcaaacgaatccaacccagacttcagcagcggacttacttactggataac
agtgatgtatacagtgtgttggacttgcagcagatagcagacgagcactatgaatcttac
ctgcagtctctgattcagtttggctctaagcacgtgcacaactgtgacctttgcacccaa
aggggcttcatatgtcagatctgcaacacagacgacatcatcttcccttttcagttcgac
agcaccaccaggtgtcccgtctgcaagacggtgtttcattctgcttgtaaggcgacatgt
tcggtctgtccacgctgcgttcgaatacaaaaatatatggagagggatttggaggactga
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integrated database retrieval system
