Garra rufa (doctor fish): 141299129
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Entry
141299129 CDS
T11039
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00280
Valine, leucine and isoleucine degradation
grf00650
Butanoate metabolism
grf00900
Terpenoid backbone biosynthesis
grf01100
Metabolic pathways
grf03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
141299129 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
141299129 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
141299129 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
141299129 (hmgcs1)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
141299129 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
PS_Dcarbxylase
Motif
Other DBs
NCBI-GeneID:
141299129
NCBI-ProteinID:
XP_073685514
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All DBs
Position
23:complement(33665549..33674791)
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AA seq
463 aa
AA seq
DB search
MGFCSDREDINSLCLTVVQRLMERNGLSYESVGRLEVGTETIIDKSKSTKTVLMQLFEES
GNTDVEGVDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGGAG
AVAMLVGPNAPLAFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYSV
YRNKIHAQWQREGLEKRCSLEDFGFMVFHSPYCKLVQKSLARLMLNDFLCNPSPNTESGP
FSGLEAFRDVKIEETYFDRDVEKAFMKASSELFDNKTKASLLISNQNGNMYTPSVYGCLA
SVLAQHTPQHLAGQRIGVFSYGSGFAATLYSIKITQDATPGSALDKMVSSLCDLEARLDS
RKKVSPDVFAQTMKLREETHHLANYIPQGSVDELFPGTWYLTRVDEKHRRQYARRSMNDD
RPLEAGLVSSSIAAEHIPSPLKKMPRIPTTPTGPEVIISNGDH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcttctgctcggatcgggaggacatcaactctctgtgtctgacggtggtgcagcgc
ttgatggaacggaacggcctgtcgtacgagagcgtgggtcggctggaggtgggcacggaa
accatcatcgataagtccaaatccaccaaaactgtcctgatgcagctcttcgaagagtcg
ggtaacactgacgtggagggagtagacacgactaacgcctgctacggaggaaccgctgct
ctcttcaacgccgtcaactgggtggagtccagctcctgggacggtcggtatgctctggtt
gttgcgggtgacattgctgtttatgccacgggcagcgccagaccaacagggggagccgga
gccgtggccatgctggttggacccaacgcccctctggccttcgagagagggctccgtggg
acacatatgcaacatgcatatgatttttataagccagacatggtgtctgagtatccggtg
gtggacggcaagctttccattcagtgttacctcagtgctttagatcgctgctactccgtc
tacaggaacaagatccatgcccagtggcagagagagggtcttgaaaagcgttgcagtctt
gaagacttcggcttcatggtgttccactctccttactgtaaactggtccagaagtctttg
gctcgactaatgctcaatgatttcctctgcaatcccagtcccaacacagagagcggaccc
ttcagcggactggaagctttcagagatgtgaagattgaggagacttatttcgacagagat
gtggagaaggcctttatgaaggccagttcagaactgtttgataataagacgaaggcgtct
ctgcttatatcaaaccagaatggtaacatgtacacaccatcggtgtacggctgcttggct
tcagttctcgcacaacatacaccgcagcatttggcaggacagagaattggtgtgttttca
tatggctcaggctttgctgctacgctctactccatcaaaatcacacaagatgctacacct
ggatctgctctggataagatggtctccagcctgtgtgacttggaggccaggctggactct
agaaagaaggtttcaccggatgtttttgctcagaccatgaagctcagagaagaaacccac
catttagcaaactacatccctcaaggctcagtagacgaactcttcccaggaacatggtac
ctcactcgcgtggacgaaaagcatcgcaggcagtacgccagacgctccatgaacgatgac
agaccgctggaggccggactggtctcttccagcattgcagctgagcatattcccagcccg
ctcaagaagatgccccgcatcccaactaccccaaccggccctgaggtgatcattagcaac
ggggatcattaa
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