Garra rufa (doctor fish): 141299445
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Entry
141299445 CDS
T11039
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00780
Biotin metabolism
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
141299445 (hlcs)
Enzymes [BR:
grf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
141299445 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
141299445 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
141299445 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
141299445 (hlcs)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
GLMA_2nd
Motif
Other DBs
NCBI-GeneID:
141299445
NCBI-ProteinID:
XP_073685905
LinkDB
All DBs
Position
23:complement(120817..158677)
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AA seq
855 aa
AA seq
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MLITLCYIYLWVRFQRHYTTVIRSALYRLSGGQSSFTFCALKPERVDLPREQRLKPPRED
TLFLRLGDRVIYITEPQACEDLSKWTLLGSSLVCGRRLESIAFIIEATSRQKIPASPHRT
NEKVLNWSDYCLPLAFSPGQPYRAVAEASLENFSRLGVAFMEDRLHMDNGLIPEKIVSVL
LRETALKELFQQQQDGRIGNKRHSELKEPRNSPQLPRKSSLHLEEHQHMDGHHLHLSSCH
ECLELENSTILSVKFASMENIPDLPDDYAAAADDDEEEEEEERGRRNASGKPPNVLVFTG
GCEERFRKIRSLLEECVDTDSYAIYHLRPQQALSEPWLENALLLVLATDQTLTPQLQLRF
LSYLSQGGKLLGLSSTLCPAGLALRPRDAQKDRICRLSFTKSDSTELHLSVLSSGSVFVR
DGGGGGGEVELWGEIGAPDGREMAIVRVTHGEDSGEAVLCQVRLETAPDAHDAQGSTGFS
ELKMSNARRYEVLTEILTSLGVSCELSQVPPHSPIYLLHTHTEQMRRFLRWLRAKTDSSG
GVVRSAAGVLRLVWAGDEPPDLCDGERALHADPPESFSEHFSLQTYREHLQTRRLGRTVL
YADVTSTTMDLLDGMTSQSPQETGLIAIAARQTQGKGRGGNAWLSPLGCAMFTLHLQLPV
DSRLGQRIPFLQHLAALAVVESVRTLPGYEDVDLRLKWPNDIYYSNLMKLGGVLVNSSLI
GQTFNLLIGCGFNVSNSNPTVCINDLVRQQNREHGRELEPLTPPQLIGRSVTLLERYISE
FQLRGPQALLPLYYRRWVHGGTRVRLWSEDGPEAEVVGLDENGFLQVMGDQGVVSVQPDG
NSFDMLKNLVVTKTS
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcacgctgtgctacatctacctgtgggtgcgcttccagagacactacacgacc
gtgatccgcagcgcgttataccggctgagcggcggccagagcagcttcacgttctgcgcg
ctgaagccggagagagtcgatctgccccgcgagcagcgcctcaaacccccgcgagaggac
acgctcttcctgaggctcggagacagagtcatctacatcaccgagccgcaggcgtgtgag
gatctcagtaagtggaccctgttgggctcttctctggtttgtggtcggcggctagaaagc
atcgccttcatcattgaggccacatcaagacagaaaattccagcgtctccacacagaacc
aatgagaaagtgctgaactggtcggattactgtctgccgttggcgttcagtccaggacag
ccgtaccgcgccgtcgccgaagccagcctggagaatttcagtcgcctcggcgtggctttt
atggaagatcgtctgcatatggacaacggtctcatccctgaaaagatagtttccgtgtta
ctcagagagacggcgctcaaagagctcttccaacagcagcaggacggcaggatcggaaac
aagcgtcacagtgagctgaaagagccacgaaactctccgcagcttcccagaaagagcagc
cttcatctggaggaacaccagcacatggacggacaccacctgcacctctccagctgccac
gagtgtctggagctggagaacagcaccatcctgtcggtgaagttcgcctccatggagaac
atcccggatctgcccgacgactacgccgccgccgcggatgacgacgaggaggaggaagag
gaggagagaggaaggaggaacgccagcggcaagccgcccaacgtgctggtgttcacgggc
ggctgcgaggagcgcttccggaagatccgctcgctcctggaggagtgcgtggacacggac
agctacgccatctaccacctgcggccgcagcaggccctgagcgagccctggctggagaac
gctctgctgctggtgctcgccaccgaccagacgctcacccctcagctgcagctgcgcttc
ctgtcctacctgagccagggcgggaagctcctgggcctgtcgtccacactgtgtcccgcc
ggactcgcgctgcggcccagagacgcgcagaaagaccgcatctgcagactctccttcacc
aagtctgacagcacggagctgcatctgagcgtgttgtccagcgggagcgtgttcgtgcgg
gacggcggcggcggcggaggagaggtggagctctggggcgagatcggtgcgccggacggc
cgggagatggccatcgtgcgcgtgactcacggagaggacagcggagaggccgtcctgtgt
caggtgcgattggagacggctccggacgcccatgacgctcaaggctccaccggcttctcg
gagctgaagatgagcaacgcccggcgctacgaggtcctgacggagatcctgacgtctctg
ggtgtgagctgtgagctgagtcaggtgccgccgcacagccccatctacctgctccacaca
cacacggagcagatgcgccgcttcctgcgctggctgcgggcgaagacggactcttctggt
ggagttgtgcggagcgcggcgggcgtcctgaggctggtgtgggccggcgacgaacctcca
gatctgtgtgacggtgagcgagcgctacacgccgacccgcccgagagcttctccgaacac
ttcagcctgcagacctacagagaacacctgcagacccgacgactaggccggaccgtcctg
tacgccgacgtcacctccaccaccatggacctgctggacgggatgacgtcgcagtcgcca
caggaaacggggttaattgccatagcggcgcgtcagacgcagggcaaaggccgcgggggg
aacgcctggttgagtccgctgggatgcgccatgttcactctccacctgcagcttcctgtg
gactcacgcctcggacagaggatccccttcctgcagcacctcgccgccctggccgtggtg
gagtctgtgcgcacactgcccggatacgaggacgtggacctgcggctgaagtggcccaat
gacatctactacagtaacctgatgaaactcggcggtgttctggtcaattcctccctcatc
ggtcaaaccttcaaccttctgatcggctgcgggttcaacgtgagcaacagcaacccgacc
gtctgcatcaacgatctggtgcggcagcagaaccgggaacacgggcgcgaactggagccg
ctcactccaccgcagctcatcggccgctccgtcacgctgctggagcgctacatctccgag
ttccagctgcgcggcccacaggctctgcttccgctctactacaggagatgggttcatggc
ggcacacgcgtgcgtctctggagcgaggacgggcccgaggcggaggtggtgggtctggat
gagaacggctttctgcaggtgatgggagatcagggcgtcgtgtccgtgcagccggacgga
aactccttcgacatgctgaagaacctggtggtgaccaaaaccagctga
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