Garra rufa (doctor fish): 141300716
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Entry
141300716 CDS
T11039
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
grf Garra rufa (doctor fish)
Pathway
grf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
141300716 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
grf04050
]
141300716 (tnfrsf11a)
04090 CD molecules [BR:
grf04090
]
141300716 (tnfrsf11a)
Cytokine receptors [BR:
grf04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
141300716 (tnfrsf11a)
CD molecules [BR:
grf04090
]
Proteins
141300716 (tnfrsf11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
RANK_CRD_2
DUF4501
Epiglycanin_C
ECSCR
Motif
Other DBs
NCBI-GeneID:
141300716
NCBI-ProteinID:
XP_073687116
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Position
24:complement(18807194..18829250)
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AA seq
582 aa
AA seq
DB search
MRVNFSASWIFQGWITHFVLALCTQAGQAISCQQNEYEHNGGCCRKCEPGKYVFAHCDSI
SSTKCRECGLEEYQPDWNSDTKCFPQKFCDEGKGFNRTRPHNPTAAEPCRCKQGFHCSLI
NCEYCEAIKKCPAGEGVKMGETGRATCVPCSYGHFSDSISIEACKKWTDCKAVGKTEKQP
GSLKTDAVCGVPSPGMTPWVVVALLSVIIVVSLVVLFLFCCKDKLNFLSVNLRTCVQNLK
GSRNQQETVTSYHGGNAPQTLPLICQERTPPESLITCPSTQLTILDETSTCTDQEQDQDR
AETSSGSSSEDSGGGPASPLSGSSCSCVFSMKEPMEVGENEDCSQLVATGLATCCSCRTG
DAIGANVEVVGLKEPLLCESCTSDVLPACDYVDLQRSQELYLDYSSPAGKEAMSEMRGVY
GDRGAVEGLYRQNEPCCCSIDSTTIPPLPSVSANDQGLSLIHSDDHKLSDPDADFQNQCS
ESALTSGQVTGNNNTTFISSGQVMNFSGEVIVVYVSQTSLGSSGGTDEPFSCPVQEESND
DSFQSEPKSNITTTTPQAKSRNGHLEKHLPVQEMTNDWSWHK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgaacttttcagctagctggatatttcaaggatggatcacacacttcgttctt
gctctgtgcacgcaggctggacaggccataagctgccagcaaaacgaatatgagcacaac
gggggatgctgcagaaaatgtgaaccaggaaaatacgttttcgcccattgcgacagcatc
tctagcacgaagtgccgtgaatgtggccttgaagaataccagccggattggaacagcgac
actaaatgttttcctcagaagttctgcgatgagggtaaaggattcaaccgcactcgtcca
cacaaccctactgcggcagaaccgtgccggtgcaagcagggtttccactgctctctgatc
aactgcgaatactgtgaggcgattaaaaaatgtcctgcgggagaaggagtcaaaatgggc
gagacgggcagagctacctgtgtgccttgttcatatggacatttctcagattccatatca
atagaagcctgcaagaaatggacagattgtaaagctgtcggcaagaccgagaaacagcca
ggaagccttaagacagatgcggtgtgtggagtcccttctcctggtatgacaccctgggtg
gtggtggcccttctgtcggtcatcatcgtggtatccctggttgttctcttcttgttttgc
tgcaaggataagctgaacttcctctcagtaaacctacgcacctgcgtccaaaacctgaaa
ggaagtaggaatcaacaggaaactgtgacttcataccatggtggcaacgctccccaaacc
ctccctctgatttgccaagaacgaacccccccagaatccttaatcacatgtcctagcacc
caactaaccattcttgatgaaacgtcaacttgtacggaccaagagcaggaccaggaccga
gccgaaacctcatcaggcagctccagtgaagactccggaggtgggcctgcgtctcctcta
tcgggcagctcctgcagctgtgtgttttccatgaaggagcccatggaggttggagaaaac
gaggactgcagtcagctagtggccacgggattggcaacatgctgctcctgcaggacagga
gatgccattggagcaaacgtggaggtcgtcggcttgaaagagcctctactgtgtgagagc
tgcacgtcggacgtcctgcccgcctgcgattacgtagacctacagcgctcacaggaactc
tatctggactacagcagccctgctggcaaagaagctatgtcagagatgagaggcgtctat
ggggaccggggtgcggtcgaagggctgtatagacagaatgaaccttgctgctgcagcata
gactccaccaccattccacctctgccgtcggtcagcgctaatgaccagggcctttcgttg
atccacagcgatgaccacaaactgtccgaccccgacgcggacttccagaaccagtgctcg
gaatccgctctcacgtctggtcaggtgacaggaaacaacaacactacttttatctccagc
gggcaggtgatgaacttcagcggtgaggtcatcgtggtgtacgtcagtcagacatcactg
ggaagcagcggaggaacagacgaacctttcagctgcccggttcaggaagaatccaacgac
gacagttttcaaagcgagcccaaatctaacataaccacaacaacaccgcaggccaagagc
aggaacggacacctggaaaaacacctgcccgtgcaggaaatgaccaacgactggtcctgg
cacaaataa
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