Garra rufa (doctor fish): 141301527
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Entry
141301527 CDS
T11039
Symbol
fads2
Name
(RefSeq) acyl-CoA 6-desaturase
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00592
alpha-Linolenic acid metabolism
grf01040
Biosynthesis of unsaturated fatty acids
grf01100
Metabolic pathways
grf01212
Fatty acid metabolism
grf03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
141301527 (fads2)
01040 Biosynthesis of unsaturated fatty acids
141301527 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
141301527 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
grf01004
]
141301527 (fads2)
Enzymes [BR:
grf01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
141301527 (fads2)
Lipid biosynthesis proteins [BR:
grf01004
]
Desaturase
Front-end
141301527 (fads2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
DUF5318
Motif
Other DBs
NCBI-GeneID:
141301527
NCBI-ProteinID:
XP_073687823
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Position
25:complement(7882685..7911854)
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AA seq
444 aa
AA seq
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MGGGGQQTDRITGTNGRFSTYTWEEVQKHTKSGDQWIVVERKVYNVSQWVKRHPGGRRIL
GHYAGEDATEAFTAFHPDLPLVRKYMKPLLIGELEASEPSQDCQKNAALVEDFRLLRERL
EAEGCFKTQPLFYILHLSHILLLEAIALMLVWYFGTGWINTAIVAVLLGTAQSQAGWLQH
DFGHLSVFKSSRWNHLVHKFIIGHLKGASAEWWNHRHFQHHAKPNVFKKDPDVNMLNAFV
VGKVQPVEYGIKKIKHLPYNHQHKYFFFIGPPLLIPVYFQVQIFHNMITHGLWVDLAWCI
SYYVRYFLCYTQFYGVFWAVLLFNFVRFLESHWFVWVTQMSHIPMNIDYEKNHDWLNMQL
VATCNIEQSAFNDWFSGHLNFQIEHHLFPTMPRHNYWRAAPRVRALCDKYGVKYEEKSLY
EAFADIVRSLEKSGELWLDAYLNK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggaggacagcagacggaccggatcaccggtaccaatggacggttcagcacg
tacacctgggaggaagtgcagaaacacaccaagtctggagatcagtggatcgtggtggaa
aggaaggtttataatgtgagccagtgggtgaagagacaccccggaggacggaggatcctc
ggacactatgctggagaagatgccacggaggcatttactgcatttcatccagaccttccg
ctggtgaggaaatacatgaagccactgttaatcggtgaactcgaagcatccgaacccagt
caagactgccagaaaaacgctgctcttgtggaggatttccgactccttcgtgagcgtctg
gaggctgaggggtgtttcaaaacccagcccctgttttacatcctgcatctgagtcacatc
ctgctcctggaggccatcgccctgatgctggtgtggtacttcggaactggctggatcaac
acggccatcgttgctgttttactgggtactgcacagtcgcaggctggatggctgcagcat
gacttcggtcatctgtccgtgtttaaatcctctcgatggaatcacttagtccacaaattt
atcatcggacacctgaagggagcgtctgcggaatggtggaaccatcgccactttcagcat
cacgctaaacccaacgtcttcaagaaggacccggacgtcaacatgctcaatgcttttgtt
gtgggaaaagtgcagcctgtggagtacggcattaagaagatcaagcatctgccttacaac
caccagcataagtacttcttcttcattggaccacctctgctcattccggtttatttccag
gtccagatctttcacaatatgatcacacatggtctttgggtggacctcgcgtggtgtata
agttactacgttcgatacttcctgtgttacacacagttctacggtgtgttttgggcagtg
cttctctttaatttcgtaaggttcctggagagtcactggttcgtgtgggtgacccagatg
agccacatccccatgaacatcgactatgagaaaaaccacgactggcttaacatgcagctg
gttgcaacctgtaacatcgagcaatccgccttcaacgactggttcagtggacacctcaac
tttcagatcgagcaccatctcttccccacgatgcctaggcacaattactggcgcgccgct
ccacgcgtgcgagcgttgtgtgataaatacggagtcaagtacgaagagaaatccttgtat
gaggcctttgcagacattgtcaggtctttggaaaaatctggagaactctggctggatgca
tacctcaacaaataa
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