Garra rufa (doctor fish): 141324093
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Entry
141324093 CDS
T11039
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb
KO
K04359
platelet-derived growth factor subunit A
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04020
Calcium signaling pathway
grf04510
Focal adhesion
grf04518
Integrin signaling
grf04540
Gap junction
grf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141324093 (pdgfbb)
04020 Calcium signaling pathway
141324093 (pdgfbb)
09133 Signaling molecules and interaction
04518 Integrin signaling
141324093 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141324093 (pdgfbb)
04540 Gap junction
141324093 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
141324093 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
grf04052
]
141324093 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
grf00536
]
141324093 (pdgfbb)
Cytokines and neuropeptides [BR:
grf04052
]
Cytokines
Growth factors (RTK binding)
141324093 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
grf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
141324093 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
HCV_NS5a_C
Motif
Other DBs
NCBI-GeneID:
141324093
NCBI-ProteinID:
XP_073689621
LinkDB
All DBs
Position
1:51441125..51459040
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AA seq
491 aa
AA seq
DB search
MRSRIPLLLAVLAAACLRFGSAEADPLPAAVVELVKGGSVSSIQDLQFLLFSESIEVEPD
SQHDNDTSNRLPRSLLDAQPAQQAICKIRTEVIEVTRSMLDRSNANFLLWPPCVEVQRCS
GCCNTKSLQCVPVLTHTRYLQVMKIQYVNKRPLYDKAVVSVLDHVECRCQPAPRPAQRRK
STSHKQEGRERSGKPRAKDELHRRDELKHNQRISLEDLLSRSWLPKERFSESEFGRDGWG
LNETQYGGAKGHHRHPGDGRRHGKTNDTATQGTMAPLPNHTEQEETDLSLRNVTQFETQT
TANQSITNQTSDFSMSTLELTNQTFVHQSNLTQENERLQTTNQTEQLISNATGIANQNRG
DVFLSVEENSQKRGETTDVEVKKEEQEQRQMDKKAKEEEMEELLLMHKILDEDKHKHHHK
VQQTNIQPDEKLQQLHHKQHTYTTTQRTGTTSPPVQHLPPHKPPRPPPHPPKKRRKQRNR
ISKSAMRALLM
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgcggatcccgcttcttctcgcggtacttgcggcggcgtgtctgcggtttggc
agtgcggaggctgatcctctcccagccgcagtggttgaattggtgaagggtggatctgta
tcttcaattcaggacctgcagtttttgctgttctctgaatctattgaggttgagccagac
agtcaacatgacaatgacaccagcaaccgtctgccacgcagtcttttggacgctcagccc
gctcagcaagccatctgtaagatcaggaccgaggtcatcgaggtcacacgctccatgttg
gaccgtagcaatgcaaatttcctgttgtggcctccgtgcgtggaggtgcagaggtgctcg
ggctgctgtaacaccaagagcctgcagtgtgtgcctgtacttacacacacaagataccta
caggtgatgaagatacagtacgtgaacaagcggccactctacgataaggctgtcgtctcc
gttctcgaccatgtagagtgccgctgtcagccggctcctcggcccgctcagcgtcggaag
tcaaccagccacaaacaagaaggacgggaacgctctgggaaacctcgggccaaagatgag
ctccatcgcagggatgaactcaaacacaaccagaggataagcctggaggacctgctcagc
cgtagctggctgcccaaagagaggttctctgaatcagaattcggccgggacggctggggt
ctgaacgagacgcagtatggaggggccaaaggtcatcaccgtcaccccggggatggaagg
agacacggcaaaactaatgacacagcaacacaaggaacgatggctccattgccaaatcat
accgaacaggaagaaactgatttgtcattgcgcaatgttacgcaattcgaaacgcagact
actgctaaccaaagtataaccaatcagacatcagatttttccatgagtacattggaattg
accaatcagacttttgtgcaccaatcaaatctaacgcaagaaaatgaacgattgcaaaca
accaatcaaacggaacaactcatctcaaacgccacagggatagccaatcagaatcgggga
gatgtgtttctgtctgtagaggagaacagtcagaaaagaggtgagactacggatgtagag
gtgaagaaggaggagcaagagcagagacaaatggacaaaaaggccaaggaggaggaaatg
gaagagctgctgctaatgcacaaaatcctagatgaagacaaacacaaacatcaccacaaa
gtacaacagaccaatatacagccagacgagaaacttcagcagctccatcacaaacaacac
acttatactaccacacaacgaacaggaactacatctcctcctgtgcaacatctcccccca
cacaaaccccccagaccacctcctcacccaccaaaaaagagaagaaaacagcgcaatcgc
atcagcaaatctgccatgagagccctgctcatgtaa
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