Garra rufa (doctor fish): 141324093
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Entry
141324093 CDS
T11039
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb
KO
K04359
platelet-derived growth factor subunit A
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04020
Calcium signaling pathway
grf04510
Focal adhesion
grf04540
Gap junction
grf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141324093 (pdgfbb)
04020 Calcium signaling pathway
141324093 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141324093 (pdgfbb)
04540 Gap junction
141324093 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
141324093 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
grf04052
]
141324093 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
grf00536
]
141324093 (pdgfbb)
Cytokines and neuropeptides [BR:
grf04052
]
Cytokines
Growth factors (RTK binding)
141324093 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
grf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
141324093 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
HCV_NS5a_C
Motif
Other DBs
NCBI-GeneID:
141324093
NCBI-ProteinID:
XP_073689621
LinkDB
All DBs
Position
1:51441125..51459040
Genome browser
AA seq
491 aa
AA seq
DB search
MRSRIPLLLAVLAAACLRFGSAEADPLPAAVVELVKGGSVSSIQDLQFLLFSESIEVEPD
SQHDNDTSNRLPRSLLDAQPAQQAICKIRTEVIEVTRSMLDRSNANFLLWPPCVEVQRCS
GCCNTKSLQCVPVLTHTRYLQVMKIQYVNKRPLYDKAVVSVLDHVECRCQPAPRPAQRRK
STSHKQEGRERSGKPRAKDELHRRDELKHNQRISLEDLLSRSWLPKERFSESEFGRDGWG
LNETQYGGAKGHHRHPGDGRRHGKTNDTATQGTMAPLPNHTEQEETDLSLRNVTQFETQT
TANQSITNQTSDFSMSTLELTNQTFVHQSNLTQENERLQTTNQTEQLISNATGIANQNRG
DVFLSVEENSQKRGETTDVEVKKEEQEQRQMDKKAKEEEMEELLLMHKILDEDKHKHHHK
VQQTNIQPDEKLQQLHHKQHTYTTTQRTGTTSPPVQHLPPHKPPRPPPHPPKKRRKQRNR
ISKSAMRALLM
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgcggatcccgcttcttctcgcggtacttgcggcggcgtgtctgcggtttggc
agtgcggaggctgatcctctcccagccgcagtggttgaattggtgaagggtggatctgta
tcttcaattcaggacctgcagtttttgctgttctctgaatctattgaggttgagccagac
agtcaacatgacaatgacaccagcaaccgtctgccacgcagtcttttggacgctcagccc
gctcagcaagccatctgtaagatcaggaccgaggtcatcgaggtcacacgctccatgttg
gaccgtagcaatgcaaatttcctgttgtggcctccgtgcgtggaggtgcagaggtgctcg
ggctgctgtaacaccaagagcctgcagtgtgtgcctgtacttacacacacaagataccta
caggtgatgaagatacagtacgtgaacaagcggccactctacgataaggctgtcgtctcc
gttctcgaccatgtagagtgccgctgtcagccggctcctcggcccgctcagcgtcggaag
tcaaccagccacaaacaagaaggacgggaacgctctgggaaacctcgggccaaagatgag
ctccatcgcagggatgaactcaaacacaaccagaggataagcctggaggacctgctcagc
cgtagctggctgcccaaagagaggttctctgaatcagaattcggccgggacggctggggt
ctgaacgagacgcagtatggaggggccaaaggtcatcaccgtcaccccggggatggaagg
agacacggcaaaactaatgacacagcaacacaaggaacgatggctccattgccaaatcat
accgaacaggaagaaactgatttgtcattgcgcaatgttacgcaattcgaaacgcagact
actgctaaccaaagtataaccaatcagacatcagatttttccatgagtacattggaattg
accaatcagacttttgtgcaccaatcaaatctaacgcaagaaaatgaacgattgcaaaca
accaatcaaacggaacaactcatctcaaacgccacagggatagccaatcagaatcgggga
gatgtgtttctgtctgtagaggagaacagtcagaaaagaggtgagactacggatgtagag
gtgaagaaggaggagcaagagcagagacaaatggacaaaaaggccaaggaggaggaaatg
gaagagctgctgctaatgcacaaaatcctagatgaagacaaacacaaacatcaccacaaa
gtacaacagaccaatatacagccagacgagaaacttcagcagctccatcacaaacaacac
acttatactaccacacaacgaacaggaactacatctcctcctgtgcaacatctcccccca
cacaaaccccccagaccacctcctcacccaccaaaaaagagaagaaaacagcgcaatcgc
atcagcaaatctgccatgagagccctgctcatgtaa
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