KEGG   Garra rufa (doctor fish): 141324333
Entry
141324333         CDS       T11039                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03420  Nucleotide excision repair
grf04110  Cell cycle
grf04114  Oocyte meiosis
grf04120  Ubiquitin mediated proteolysis
grf04141  Protein processing in endoplasmic reticulum
grf04310  Wnt signaling pathway
grf04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    141324333 (rbx1)
   04120 Ubiquitin mediated proteolysis
    141324333 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    141324333 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    141324333 (rbx1)
   04350 TGF-beta signaling pathway
    141324333 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    141324333 (rbx1)
   04114 Oocyte meiosis
    141324333 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:grf04121]
    141324333 (rbx1)
   03400 DNA repair and recombination proteins [BR:grf03400]
    141324333 (rbx1)
Enzymes [BR:grf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     141324333 (rbx1)
Ubiquitin system [BR:grf04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   141324333 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     141324333 (rbx1)
   Cul2 complex
     141324333 (rbx1)
   Cul3 complex
     141324333 (rbx1)
   Cul4 complex
     141324333 (rbx1)
   Cul7 complex
     141324333 (rbx1)
   Cul8 complex
     141324333 (rbx1)
   Cul9 complex
     141324333 (rbx1)
DNA repair and recombination proteins [BR:grf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      141324333 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      141324333 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 141324333
NCBI-ProteinID: XP_073689638
LinkDB
Position
1:complement(52440593..52442787)
AA seq 108 aa
MAAAMDVDTPSGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcgatggatgtagacaccccgagtggagctaacagtggagccagtaaaaaa
cgttttgaagtcaaaaagtggaatgctgtggctctgtgggcttgggacattgtggtggac
aactgtgccatttgcagaaatcacattatggacctctgtatagagtgtcaggccaatcag
gcgtcagctacatcagaggagtgtacagtggcctggggagtctgtaatcatgcgtttcac
tttcactgcatctcccgctggctgaagaccagacaggtgtgtcctctggacaacagagag
tgggagttccagaagtatggccattag

DBGET integrated database retrieval system