Garra rufa (doctor fish): 141325564 Help Entry 141325564         CDS       T11039                                  Symbol slit1a Name (RefSeq) slit homolog 1a   KO K06838   slit 1 Organism grf  Garra rufa (doctor fish) Brite KEGG Orthology (KO) [BR:grf00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:grf00536]     141325564 (slit1a) Glycosaminoglycan binding proteins [BR:grf00536]  Heparan sulfate / Heparin   Axon guidance molecules    141325564 (slit1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_8 LRR_4 LRR_5 EGF Laminin_G_2 Laminin_G_1 LRRNT hEGF LRRCT EGF_TEN LRR_1 LRR_9 LRR_14 EGF_Teneurin EGF_DL_JAG LRR_EndoS EGF_3 Motif Other DBs NCBI-GeneID:  141325564 NCBI-ProteinID:  XP_073690419 LinkDB All DBs Position 2:48032217..48149619 Genome browser AA seq 1526 aa AA seqDB search MPARGGYSVGRVVEACIRILLLCKAATACPALCTCSGTTVDCHGLGLKTMPRNIPRNTER LELNGNNLTRINRNDFSGLKYLRVLQLMENQIGTVERGAFDDMKELERLRLNRNQLNQLP ELLFQKNAALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRALRGLEV LTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCNIAWLSQWLRERPTIGLFTQCSSP APLRGLNVAEIQKHEFSCSGQSEDAAVQSCSFVTGSCPAACTCSNNIVDCRGKGLTAIPA NLPDSMAEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVLY GNKITDLPKGVFDGLYALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTF TSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCTSPRRLANKRIGQIKSKKF RCSAKEQYIIPGTEDTRLSSDCNNDPVCPAKCRCESNVVDCSNLRLNRIPEHIPASTTEL RLNNNEITAIEAIGAFKTLSHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDSVH SGMFRGMEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTITPGAFDTLQSLST LNLLANPFNCNCHLAWLSSWLRNRKIVTGNPRCQRPAFLKEIPLQDVAIPDFRCQEDQEE ASCTPPVQCPTECTCLETVVRCSNKHLHVLPKGIPRNVTELYLDGNQFSVVPKELSNFKN LQLVDLSNNKISSLTNSSFANMSQLTTLILSYNALRCIPTLAFGGLRSLRLLSLHGNDIS ELPDGIFNDAASLSHLAIGANPLYCDCRLRWLSDWVKTGYKEPGIARCVGPHGMEGKLLL TTPAKRFECQGEVDTAILAKCNPCMSSPCLNHGSCEADQTDGFRCHCSESFKGKNCETPL NACVSEPCKNGGTCHMSGEEDEGFSCSCAAGFEGPTCDIDTDECKDNDCQNGATCIDGIN NYTCLCAPFYTGEMCEDLEDMCSSARSPCKHQSTCFITVTGPKCICAPGYVGDDCSVNYD DCKDHRCQNGARCVDEVNGYACVCPKGYSGQLCEVPSTPRSLCDLADCQNNAPCVERGGH ALCQCLEGFGGPRCEKLVSVNFVDRDSYLLLSDLKNWPQANITLQVSTAEDNGILLYNGD NDHIAMELHEGHVKVSYDPGSQPSHAIYSTETINDGQFHTVELVTFDQMVNLSIDGGIPT TMDSFGKVQPLRGEAPLYVGGMPVSVHPTAPRIWQIQNGSSFHGCIQNLYINNELQDFTK TQMKPGVVPGCEPCRKIYCLHGICQPNTATGPVCHCQPGWSGQHCDQPLANPCMGSKCVH GRCIPMDVQSYRCECQEGFHGALCNQQEELFNPCRKLQCKHGHCQISDTGDAYCHCEVGY TGEFCDKESECHGEAVRDFYQVQRGYAICQTTRMVSWVECSGTCDTGSCCASQRMKRRKY TFECSDGTSFSEEVEKTIKCGCVGCM NT seq 4581 nt NT seq  +upstreamnt  +downstreamnt atgcctgcgagaggaggatactctgtaggcagagtggtggaggcgtgcatccggatactg ctgctgtgcaaggctgccacggcgtgccctgcgctctgcacttgcagcggcaccacagtg gactgccatgggctggggctcaaaaccatgcccaggaacataccccgaaacacagagagg ctggaactgaatggaaacaacctcacacgcatcaacagaaatgacttttctggactcaag tatcttcgagttttgcagctgatggagaaccagattggcacagtggagcgcggtgcgttt gatgacatgaaagagctggagagactacgtctgaacagaaaccagcttaaccagcttcca gagcttctgttccagaagaatgccgctctgtccagactagacttaagtgagaacttcatc caggcgattccccgaaaggccttcagaggagctacggacatcaagaaccttcagttagac aagaatcacatcagctgcatcgaggacggagctttccgtgcactacgtggacttgaagtt ttgactctgaacaacaacaacatcagcagcatcccagtgtccagctttaaccacatgccc aagctcaggacgttccgcttacattccaacaacctgaactgcgactgcaatatcgcctgg ttgtcccagtggttgcgtgagcggccaaccatcggtctgttcacacagtgcagctctcca gctccgctacgaggacttaatgtagccgagatccaaaaacacgaattcagctgttcaggt cagtccgaagatgctgctgttcagtcgtgtagtttcgtcactggttcgtgtccggccgcc tgcacctgcagtaataatattgtggactgcagagggaaaggactgacggcgatcccggcc aacctgcccgacagcatggcagagatacgactggagcaaaacagcatcaaatccatccct cctggagcgttttctccttataagaaactgcgcaggatagatctcagcaacaaccagatt tcagagatcgctcctgatgccttccagggcctgcgctccctaaactcactggttctgtac ggcaacaagatcactgatctgcccaaaggagtgtttgacggactctacgccctccagctg ctccttttgaatgcaaacaagatccactgtcttcgtgccaacacctttcaggacctgcag aatctctcgctgctttctttatatgacaacaaaatccaaacgctggccaagggcaccttc acctcgctgcgtgccatccagacccttcatttggctcagaatcccttcatttgcgactgt aatctgaagtggttggccgattacctgcgctccaaccccatcgagaccagcggcgcccgc tgcaccagccctcgccgcctcgccaacaaacgcatcggccagatcaagagcaagaagttc cgctgctccgccaaagaacagtacatcatcccaggaactgaggacaccaggctgagcagt gactgtaataatgatccagtctgtccggccaaatgccgctgcgagtccaacgtagtggac tgctccaatctacggctgaaccgcatccctgaacacatcccagcatccaccactgaactg cgtctcaacaataacgagatcacggcaatagaggccataggcgctttcaagacgctttct cacctgaagaaaataaacctgagcaacaataagatctcagagatcgaggacggggcgttc gaaggggcgtcttcggtcaacgaactgcacctgacggcgaaccagctggattcagtgcac agcgggatgttcagagggatggagggtctgcgcatgctaatgctgcgcaacaaccgcatc agctgcattcacaacaacagtttcactggcttgcacaacgtccgtctgctgtcgctgtac gacaacacgctgaccaccatcacacccggagccttcgacacgctgcagagcctctccacc ctaaacctgctagccaacccgttcaactgtaactgccatctggcgtggctgagcagctgg ctgaggaaccgtaagatcgtgactggaaacccacggtgccagcggccggcgttcctcaaa gagattcccctgcaggatgtagctataccagacttccgctgccaagaggatcaagaggaa gcgagctgcacgccgcctgtccagtgtcccactgagtgcacctgtctggagaccgtggtc cgctgtagcaacaaacacctacacgtcctacccaaaggaatcccgcgaaacgtcaccgag ttgtatctggatggaaaccagttcagcgtggtgccgaaggagctgtccaacttcaaaaac ctgcagctagtagacctgagtaacaacaaaatcagctcgttgaccaactcttcgtttgcc aacatgagtcagctgaccaccctgatcctgagctataatgctcttcgctgtatcccgact ctggcgtttggaggtctacgatctctccgattgctgtctctgcatggtaatgacatctct gaactgcctgatgggatcttcaacgacgctgcgtcgctgtcgcatctggcgattggtgcg aaccctttgtactgtgactgccgcctgcgctggctctctgactgggtgaaaactggctac aaggagcctggcatcgcacgctgtgttggaccgcacggcatggagggaaaattactgctc accacccctgccaagagatttgaatgtcaaggtgaagtggacactgctatactagcgaag tgtaacccgtgcatgtctagcccctgtctgaaccacggcagctgcgaggccgatcagacg gacggcttcaggtgtcactgttcagaaagttttaagggcaagaactgtgagacgccactc aacgcttgtgtcagtgaaccctgtaagaacggaggaacgtgccacatgtctggagaagag gatgaaggctttagctgttcatgtgctgcaggctttgaaggtcccacatgcgacattgac acagacgagtgtaaagataatgactgtcagaacggagcaacctgcatagacgggatcaac aattacacctgtttatgtgcccctttttacacaggggagatgtgtgaggatctggaggac atgtgttcttctgctcgcagtccctgcaaacaccaatctacctgcttcatcaccgtcact ggaccgaagtgtatatgcgcacctggatatgtgggtgacgactgcagtgtgaactatgac gactgtaaggaccacaggtgtcagaatggggcacggtgtgtggacgaggttaacggatac gcctgcgtttgccccaagggctacagtggacagctttgtgaagtcccgtctactccacgc tctctctgcgacctggctgactgtcaaaacaatgccccctgtgtggagcgagggggccat gcactgtgtcagtgcctggaagggtttggtggaccacgctgtgaaaagttggtcagtgtc aactttgtggaccgagactcctacctgctgctgagtgacctgaagaactggcctcaggct aacatcacgctacaggtgtctacagcagaagacaatggcattcttctgtacaatggggac aatgaccacattgctatggagcttcatgaaggtcatgttaaagtcagctacgaccctggc agccaaccaagtcatgcaatctacagtactgagaccatcaatgatggtcagttccacact gtagaactggtgacctttgaccagatggtgaacctttccatagatggtggtatcccaaca accatggacagctttggtaaagtgcagcccttgagaggagaagctccactatatgtggga ggcatgccggtcagcgtccaccccacagctccccgcatctggcagatacagaacggttcc agttttcacggctgtattcagaacctttacatcaataatgagctacaagacttcaccaag acccagatgaaacctggtgtggtgcccggatgtgagccctgtcgaaagatatactgcctc catggcatttgccagcccaacaccgccacaggccccgtatgccactgccagcctggatgg agtgggcaacactgcgaccagcctttggcgaacccctgcatgggcagcaagtgtgtccat gggagatgtattccaatggacgtgcagtcgtaccgctgtgaatgccaggagggttttcac ggtgccctgtgcaaccagcaggaagagctcttcaatccatgcagaaagctacaatgcaaa catggtcactgtcagatatctgacacaggagatgcctactgtcactgcgaagtaggctac actggagagttttgtgacaaggagtctgagtgccatggagaggcggtgcgggacttctac caggtccagcgtggttacgccatctgtcagaccactcgtatggtgtcgtgggtggagtgc agtggtacctgcgacaccggctcctgctgcgccagtcaaaggatgaaacgcaggaaatac actttcgagtgcagcgatggcacatccttcagcgaggaggttgaaaagaccatcaagtgc ggctgcgtggggtgcatgtag

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