KEGG   Garra rufa (doctor fish): 141325904
Entry
141325904         CDS       T11039                                 
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
  KO
K05126  proto-oncogene tyrosine-protein kinase Ret [EC:2.7.10.1]
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04010  MAPK signaling pathway
grf04020  Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    141325904 (ret)
   04020 Calcium signaling pathway
    141325904 (ret)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:grf01001]
    141325904 (ret)
Enzymes [BR:grf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     141325904 (ret)
Protein kinases [BR:grf01001]
 Receptor tyrosine kinases (RTK)
  RET family
   141325904 (ret)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr RET_CLD3 RET_CLD1 Pkinase RET_CLD4 RET_CRD Cadherin Cadherin_FAT4_N Pkinase_fungal RIO1 ABC1 Haspin_kinase Lamp2_2nd
Other DBs
NCBI-GeneID: 141325904
NCBI-ProteinID: XP_073690729
LinkDB
Position
2:24816936..24849370
AA seq 1099 aa
MGTTRGIVWGDIAVLLLLLSEGSLGLYFPQRVYTETIYVGQLQGSPVLQVHSMRESNTER
PYFTLCSHRDIYTSWFHMDEATGVLSMNKTLEWSDFSSIRSSLVRPEKELNLKVGVSSVP
MQKRMCEFLPKAEVKLTFINDTAPSCGQVELKTLCFPDKISKPHITENRMPGALRQLQRF
TLMNICPNYTISYGVEAVSPAPFAVDGSTSELVVTAPVDREESEAYHLDLVCMIRTEDML
EKFFSSLHVNIYDEDDNPPYMNGTDTEDIKIEFNRSKGTVYGTLFVYDRDTTPVYPTDQI
QNKLVGTLMTNDSWIKNTFTIEHKFREETAIFGNVRGTVHEYKLKLSQNLSVTEQRSFQV
DYLVNDTTFPGPEGTVLLHFNVTILPVSIRFTNVTYFFTVSLKATTYSQIGSVCVDNCLK
FQGIDVTYQLEIADRNISADAQSCYRAVGLAQNPNEKTGVLYVNDTEVLRRSQCQELQYV
VIAEEQQSKFQAKTQLIVIFEGEDLTRLDEQRVLACAEKRQRGECEASRGLGAPTGRCQW
RQSRDKGISPNYSTCSPDLRTCPDGYCDAIESKNISICPQDCSSQPIIGGYERDLYGIKA
GHGTCYCFPEKCFCEKDELEEAICDDMCKTVIATGVLLSFIVSIVLSSYFIHRYHKSTPK
PPIASAEMTFRRPAQSYPISYSANNVRRASLDSMENQVAIETFKIPEDPKWEFPRKNLVL
GKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQVNHPH
VIKMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGNDANRNSSYLENPDERAL
TMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYV
KRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKT
GYRMEKPENCTDEIQEPDKRPTFSDISKELEKMMVKSRDYLDLAASTPADALLYDDSLSE
EDTPLVDCSNAPLPRTLPSTWIENKLYGMSYPNWPEKSPVPLNRLDATNPVFTRYANDSV
YANWMALHSPAKIVDTLDS
NT seq 3300 nt   +upstreamnt  +downstreamnt
atgggaactacgcgtggaatcgtttggggagacatcgcggtgctcctgcttctcctctct
gaaggttcacttggactgtattttccacaaagggtgtacacagaaaccatctacgtgggt
cagctacagggatcaccggtccttcaggtccattcaatgcgggaaagcaatacagagagg
ccctatttcaccctgtgctcccacagagacatttacacatcatggtttcacatggatgag
gcaactggggtcctttcaatgaacaaaaccctggagtggagcgactttagtagtatacgc
agcagcttggtcaggcctgagaaggagctcaacctgaaggtcggagtctcttcagtgccc
atgcagaaacggatgtgcgagttccttcccaaagcggaggtcaaactgacgtttattaat
gacacagcgccctcatgtggtcaggtcgagctgaaaacattgtgtttccctgacaagatt
tcaaaaccccacatcacagagaaccgtatgccaggggccctgcggcagctccagcgcttt
acacttatgaacatttgtcccaactacaccatcagttacggagtggaagcagtctctcca
gctccatttgctgttgacggctccacttcagaactggtggtcacggcacctgtggaccgt
gaggagagtgaagcataccatctggatttagtgtgtatgatacggactgaagatatgctg
gagaaattcttcagttctctgcacgtgaacatctatgatgaggatgataatcctccatat
atgaatgggactgacactgaggacatcaaaatagagtttaaccgcagtaagggaactgtc
tatggaactctgtttgtgtacgacagggacacaacgcctgtttatcccacagaccaaatt
caaaataaattagtgggcaccttaatgaccaatgactcctggatcaaaaacacttttact
attgaacacaaatttagagaagaaacagccatctttggaaacgtccgcgggacagttcat
gaatacaagttgaaactcagtcagaatctgtctgtgacagagcagcgttcatttcaggtg
gactacctggtcaatgacaccactttccccggcccggagggaacagtgctgttacatttc
aatgtgactatcctgccggtttctatccgctttaccaatgtcacctacttcttcactgtg
tcgctgaaagcaacaacatactcccagattggaagtgtctgcgtggacaactgtctgaag
tttcaaggcattgacgtcacgtatcaattagagatcgcagacaggaacatctctgctgat
gctcagtcatgttatagggcagttggccttgcacagaacccgaatgagaagacaggtgtg
ctctatgtgaacgacactgaggtgttacgcagatcacagtgccaagagctgcagtatgta
gttattgcagaggagcagcagagcaagtttcaggccaagacgcagctcatcgttattttt
gagggtgaagatctcacaaggctggatgagcagcgggttttggcttgtgcagaaaagaga
cagcgaggggagtgtgaggcgtctcgaggcctgggagccccaacaggcagatgccagtgg
agacaaagcagagataaaggaatatcgccaaattactccacctgttcccctgacctgcgc
acgtgtccagatggttactgtgatgccattgagagtaaaaacatttccatatgtcctcaa
gactgctccagtcagcccataatcgggggttacgagagggacctgtatggaatcaaagct
ggacatgggacctgctactgttttccagaaaagtgcttttgtgaaaaggatgaattagaa
gaggctatttgtgatgacatgtgtaagaccgtcattgcaactggtgtcctcctctccttc
attgtctccattgtcctgtcctcgtacttcatccaccgttatcacaagagcacacctaag
cctcccatcgcctcagctgaaatgaccttccgccgaccagcccaatcctacccaatcagt
tactcggccaacaatgttcgtcgagcttctctagattccatggagaatcaggtggccatt
gaaaccttcaaaatacctgaagatccaaagtgggagttcccacgaaagaacctagtgctg
ggtaagactcttggagaaggagagtttgggaaggttgtgaaggccacggctttccggctc
aaaggaaaagctggatacactacagttgctgtaaagatgttaaaagaaaatgcatctcac
agtgagcttcgagacctcctgtcagagttcacattgctcaagcaggttaatcaccctcat
gtcataaaaatgtacggagcttgcagccaagatggtccattatacttaatcgttgaatac
gccaagtacggctcactgcggaacttcctgagagagagccggaaagttggacccagctac
atggggaatgatgccaaccgcaactccagctacttggaaaacccagatgaaagagctctg
accatgggcgacctcatctcctttgcatggcagatctccagaggaatgcaatacctggct
gaaatgaagcttgttcacagagacctggctgctaggaatgtgctggtggcagaaggaaga
aagatgaaaatatctgactttggtttatctcgagatgtttatgaggaagattcatatgtg
aagaggagcaagggtcgtattcctgttaaatggatggctatagaatctttgttcgatcac
atctacactacacaaagtgatgtctggtcttttggcgtcctcttatgggagattgtgact
ctgggtggaaacccttacccaggcattgctccagaacggcttttcaaccttctgaagacg
ggttacagaatggagaaaccagagaactgcacggatgaaatacaagagccagataagcgt
cccactttctcagacatcagcaaagaacttgagaagatgatggtgaaaagccgagactat
ctggatctcgcggcctccacgccggcagacgcgctgctgtatgacgactccctctctgaa
gaggacacacccttagtggactgtagtaacgcccctctccctcgaaccctcccctccact
tggattgaaaacaagctctatggcatgtcatacccgaactggccagagaagagcccggta
ccgctcaacagacttgatgccactaaccctgtctttacaagatatgccaatgatagtgtt
tatgcaaactggatggctttgcattctcccgcaaaaattgtggacacgctcgatagttaa

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