Garra rufa (doctor fish): 141326362
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Entry
141326362 CDS
T11039
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
grf Garra rufa (doctor fish)
Pathway
grf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141326362 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141326362 (c9orf72)
Membrane trafficking [BR:
grf04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
141326362 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
141326362
NCBI-ProteinID:
XP_073691207
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All DBs
Position
2:31689754..31701769
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AA seq
462 aa
AA seq
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MSAACPPQSPGVVKTEVLVEDWCPVLAATFAYWDNILGPRVQHIWAPKGQGLSLLSDGEV
TFLANHTLNGEILRSAESGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHSVCVERLKHIIRKGRICMQKGYNIISVLSSEIVPIMELLTSMKKHSVPEEV
ELKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPEKVNKIVLTLCLFLTPAE
RKCSRLCHPDGSFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYHQRRYMRAELSALWKAASEDDISSDNLINAQDSFTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKALTLLRYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLNIIMAMTEKLRAGLHSFVFGKSFLTSVQERDLLINF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcctgtcccccgcagtctcctggtgtggtgaaaactgaagtgctggttgag
gactggtgtcccgttctggctgcgaccttcgcttactgggacaacatcctgggacctcgg
gtacagcacatctgggcccccaaaggtcaggggttgtcgctgctcagcgacggagaggtc
acgtttctggccaatcacacgctgaacggcgagattttgcgaagtgcagagagtggcgca
gtggacgtgaagttcttcgtcttggcagaaaagggagtcatcatagtctcgctgattttt
gacggggagctcaagggtgataagaacacttgcgcgctgtcaatcatcctgccgcagtca
gagctaagcttttacctgccactgcacagcgtgtgtgtggagagactcaaacacatcatc
cgcaagggacgcatttgcatgcagaagggttacaacataatctctgtgttgtcatctgag
attgtgcccataatggagcttcttacttctatgaagaaacacagtgtaccggaggaagtg
gagctaaaggacactgtgctcaatgatgatgatattggagacagctgtcacgaagacttt
ttacacaaggccatcagctctcatctacagacttgcggctgttcaatggtggttggcagc
aatcctgagaaagtcaataagatcgtgctcacgctgtgcctcttcctcactcctgcggaa
agaaagtgctctcgactgtgtcatcccgacggctcatttaaatatgacaccggtctcttt
gttcaaggcctccttaaggactccacaggcagctttgtgttgccctaccggcaggtgctc
tactctccataccccaccacccacatcgacgtagacattaacacggtgaagcagatgcca
ccctgccacgagcacacgtatcatcagcggcgctacatgcgtgctgagctcagtgccctc
tggaaggccgccagcgaggatgacatcagttctgacaacctcatcaatgcccaggactcc
ttcaccccagacttgaatatatttcaggacgtgatgcacaaagacacacttgtgaagtcc
ttcatagatgaggtatttctcttgaaaccaggcctgtctctgcggagtgtgtatttgtcc
cacttccttctcctgctgcacaggaaggccctgacactgctcagatatattgaggatgag
acgcagaagggcaaaaaacctttcagatctctacgcaacctgaaaaccgatttggactta
acagtggagggagacttgaatatcatcatggcgatgacggagaagctgcgggcaggtctt
cactccttcgtctttgggaagtctttccttaccagtgtgcaggaacgtgacctcctcatt
aacttctga
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