Garra rufa (doctor fish): 141326491
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Entry
141326491 CDS
T11039
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04217
Necroptosis
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
141326491 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141326491 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141326491 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141326491 (tnfaip3)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
141326491 (tnfaip3)
Peptidases and inhibitors [BR:
grf01002
]
Cysteine peptidases
Family C64
141326491 (tnfaip3)
Ubiquitin system [BR:
grf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
141326491 (tnfaip3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-A20
OTU
OTU_Vertnin
Motif
Other DBs
NCBI-GeneID:
141326491
NCBI-ProteinID:
XP_073691336
LinkDB
All DBs
Position
2:complement(46275685..46285446)
Genome browser
AA seq
780 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRERVPNDVVKPSASGGLIHHLRSMHRYTLEMIRMSQF
PQAFREVIQAAILDRAMQSSLEQEKRLNWCREVKKLVPLRTNGDGNCLLHAASQYLLGVQ
DTDLVLRKALYAVLKETDTSNFRTRFQTELLHSQEFTQTGLRYSTLNWEEEWVKIVEMAS
PVSSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVLRSMKSGSSFSPLNVGGIYLPLHW
PPGECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGGFEDLRVHFLTEKEQQQ
KEKLLKDYLMLIEIPVIGLGYDPTQIITAARLDEGNLPEDMNLMEDYLQLVNHEYKRWQE
DKESLWAPQSQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQAGRKPEA
ISTTNQTSSSDPESRGRLERSVLPSPRSAPPTAPSLSLYSETHAMKCKTPGCLFTLSVEH
DGLCERCFTARQNRPAANGPPQGPSHGWWASGSREREKERERERDRERDTEKCVMCRQEV
FRIFNGLCPPCMQRTAISERGDAQQEEPRTEASVWALHRETEHLGTTGHTWQTPAARQCK
RSGCQFFGTPEKLGFCTICYLDYQTNHLATPAIVQPRHTSEAGFQNCPRCRGQGCGAEGK
AMLEGYCNKCFVKEQSARLNQAASRGSHSPPLVTRASKPRPPPMLTQAQCRRSGCKNLSP
GCTDLCPDCLSRGQREGRRAQAPKEKSKQRCKTQGCDHYANQEKQGYCNECDHFKQIYRG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagggccagaacttcctgcccaagttcctgtttgtgagtaacctcctgaaggcc
gtgaaaatccgagagcgggtgcccaatgacgtggtcaagccttcggccagcggcggcctg
atccatcacctgcgcagcatgcatcgctacacgctggagatgatccgcatgagccagttc
ccgcaggccttccgcgaggtcatccaggcggccatcttggaccgggccatgcagagctcg
ctggaacaggagaagaggttgaactggtgccgtgaggtcaagaagctggtgccgctgagg
accaacggtgatgggaactgcctgctccacgcagcctctcaatacctgctgggggttcag
gacacagacctggtgctgcgaaaggctctttatgcagtgctgaaggaaacagacactagt
aactttagaacgcgctttcaaacagagctgctgcactctcaggagttcacccagactggc
ctgcgatacagcactttgaactgggaggaggaatgggtgaagattgtagaaatggcttct
ccggtgtccagcagtaatggcctacagtttgactctttagaggatattcatatctttgtg
ctttcaaacattctgcggagaccaattattgttattgcagaccaagtgcttagaagtatg
aagtctggttcctccttttcaccccttaatgttgggggcatatacctgcctttgcattgg
cctccaggagaatgctacaaatatcccatagtgcttggctatgactcccagcactttgca
cctctgataacaatcaaagacagcggcccagagatccgtgctgtgccattgataaaccca
ggacggggtgggtttgaagatcttcgagtgcactttctgacagaaaaggagcagcaacag
aaggagaagttgctgaaagactacctaatgcttatagaaattcccgtcattggcctgggc
tacgatcccacacagatcatcactgcagccagactggatgaaggcaacctacctgaggac
atgaacctgatggaggactacctacaactggtcaaccatgaatataagcgctggcaggaa
gataaggagtctttatgggcaccccaatcccagcgtccacctcccttctccgtctcccaa
ctctctctcatcgagatccgctgtgccacaccccgctgtaccttctacgtctctgtggac
actcaaccccactgtcacgagtgcttcgaaaagcgacaggcaggtcgcaagccggaggcc
atttccaccacaaatcaaacctcatcctctgaccccgagagtcgaggaaggctggagcgc
tccgtcctgcccagcccacgttccgcaccccctacggccccaagcctaagcctttacagt
gagactcatgccatgaagtgcaagacacccggatgcttgttcactcttagcgtggagcac
gacgggctgtgtgaacgctgctttacggcgaggcaaaaccgaccggctgctaacgggcca
ccgcaaggcccctctcatggctggtgggcctcgggcagccgagaacgagagaaggaacgg
gagagggagagagatcgagaaagggacaccgagaaatgcgttatgtgccgacaggaggtc
tttaggatatttaatggtctttgcccaccctgcatgcagaggactgccatttctgagagg
ggggacgcccagcaggaggagcctagaaccgaggcctcagtatgggcactgcatagggag
accgaacaccttggcaccaccggccacacctggcagacaccagccgcccggcagtgtaaa
cgctccggctgccaattctttggaacgccagagaagctgggattctgcactatatgttat
ctggactaccagaccaatcacctggccacccccgctattgtccagcccagacacacatcc
gaggcgggttttcagaactgtccgcggtgccggggtcagggctgcggtgccgagggaaag
gccatgctagagggttactgcaacaagtgctttgtgaaggagcagagcgctagactcaac
caagctgctagcaggggctctcattccccacctctcgtcacacgggcctcgaaaccacgt
ccacctccgatgcttacccaggcacagtgtcggcgtagcggttgcaagaacctctccccc
ggctgcacggacctctgcccagactgcctcagccgcggccagcgagagggtcggcgtgcc
caggcgcccaaagagaaaagcaaacagcgctgcaagacgcagggctgcgaccactacgct
aaccaagagaaacaaggctactgtaacgaatgtgaccacttcaagcagatttaccggggc
tga
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