Garra rufa (doctor fish): 141331165
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Entry
141331165 CDS
T11039
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
grf Garra rufa (doctor fish)
Pathway
grf03320
PPAR signaling pathway
grf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141331165 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
141331165 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141331165 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
grf03310
]
141331165 (nr1h3)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
141331165 (nr1h3)
Nuclear receptors [BR:
grf03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
141331165 (nr1h3)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
141331165
NCBI-ProteinID:
XP_073692185
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Position
3:39971347..39995041
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AA seq
441 aa
AA seq
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MSTLSTTDITDVGHGDSLCSGSEEGPSAATAEVKQEILSLTASYGTSHNELNDTLLMEPN
DIKMYPTEDTPAPEGQPVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRR
SVIKGAQYTCKNSGRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRLKKMKKQEE
ETARTSAVAAPSPAPEMPPLAPEQQEMIEKLVAMQKQCNKRSFLDRPKVTPWPQSQDPLN
REVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSRRY
NPTIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKGMNDLHLDEAEYALLIAINIFS
ADRPNVQDHELVERLQQPYVDALHSYIRIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVF
ALRLQDKKLPPLLSEIWDVHE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccctttctacgactgatatcactgatgttggtcatggagactctctctgctct
ggcagtgaagagggcccttcagcagcgacagcagaagtgaaacaggagattctcagtctg
acggcctcatacggcacctcacacaatgagctgaacgacactctgctcatggagcccaac
gacatcaagatgtaccccacagaggacacacctgcacccgagggtcagccagtcaagaga
aagaaaggccctgctcctaagatgttggggaatgaggtgtgtagcgtatgtggagacaaa
gcatctggctttcattacaacgtgctgagctgtgagggctgtaaaggtttcttcagacgc
agcgtcatcaaaggagctcaatacacctgcaagaattcaggccgctgtgagatggacatg
tacatgcgccgcaagtgtcaacagtgccgtctgcgcaagtgcagagaagcaggcatgctg
gagcaatgtgtgctgtcagaagagcagatccggctgaaaaaaatgaaaaaacaggaagaa
gagacggcacgtacctctgcagtggcagcacccagccctgcccctgaaatgccccctctg
gctcctgaacagcaggagatgatcgaaaaactggtggccatgcagaaacagtgcaacaaa
cgctcttttctggaccggcccaaagtcactccttggccacagagtcaggacccacttaac
cgagaggttcgacagcagcggtttgctcatttcactgagctggccatcatgtctgtgcag
gagattgtagactttgctaaacagctgcctggcttcctggagctcacccgagaggaccag
atcgccctgctgaagacctccactatagagatcatgctgctagagacttccagacgttat
aacccaacgatagacagcatcacctttctcaaagacttcagttacaataaggaggatttt
gccaaagcagggctgcagtttgagttcatcaaccccatttttgagttttcaaaaggcatg
aatgacctccacctggatgaggcagagtacgctttgctcatcgctatcaacattttctca
gcagaccgaccgaacgtgcaggatcacgagttagtggaaagactacagcagccatatgtg
gacgctctccattcttacatcagaataaaacgacctaacgatcatctgatgtttccccgg
atgctgatgaagctggttagcctacgcacactgagcagcgtccactcagagcaagtcttt
gctctgcgcctccaagacaagaaactcccacctctgctttccgaaatttgggatgtccac
gagtga
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