Garra rufa (doctor fish): 141331980
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Entry
141331980 CDS
T11039
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141331980 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
grf04054
]
141331980 (nod2)
Pattern recognition receptors [BR:
grf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
141331980 (nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
WHD_NOD2
LRR_4
AAA_16
nSTAND_NTPase5
AAA_29
AAA_22
AAA_30
Viral_helicase1
nSTAND3
T2SSE
NB-ARC
Motif
Other DBs
NCBI-GeneID:
141331980
NCBI-ProteinID:
XP_073693137
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All DBs
Position
3:36741550..36750774
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AA seq
982 aa
AA seq
DB search
MSTHQLVLKQRAELLTVLCGGGTAEPLDCVLDLLLAWEVLVWEDYLSIRVAEKPLCSNVR
QLLDVVYEKGEDACSLLLAAMNQVLPEEQKVGLCFGKECAVVYKDRPDTATLTLLADRPV
LVRKLRDNIDGALNALLTTGCFNIKDCDVVQLPVYTPSQQVRRLLDQVRFKGETAAQTLL
QYLEQTEPTRPNPEDKENHLSANVLLYQKKLRSSVAAQSHSLSTYGGTGRFSLDDIYTDG
LLEVMDGSGETTTLGLEDVVGPLGTLNEDADTVLVSGEAGSGKSTLLQRLHLLWAREALL
TNTFLLFPFSCRKLNAEHRELSLKELLFLHCCWPDRGQDEVFQFILDHPNLVLFTFDGLD
EFKQGFTDEERHCCPTKQVPIPVLLFNLLQGTLMKGVMKVVTSRPQAVGPSLKRYLRKEV
LLKGFSPGGIDCFIKKHHSDPAMARRVIESLQANTVLLSLCHIPVFCWIVTKCHQELLAG
QDGVPQTITDVYLLVLQHFFQRKSSQSQGVLGKAWLEEHLDTVIKLGQLAFEGLEASCYV
FSGYELQRNGLTEQDVGMGFLIYCNDLSVTDCKHYEFLHITLQCFFSALYVVLNRNSDRS
AISRLFQPQYRQLSGRSQRCLGHCIDSSVEEGESHVTETPNLQITAQFVSGLLSQRHHQL
LVECCPAAVRDRKAKQAVKSLSKGMQRHFKSIPRPVEGEKKSMHAMPSFVWLIKCIYEMQ
DNSIAQDTMAKLDVEHLKLTYCNIGPVECTALAYVLKYLRNPVGLQLDNNSVGDVGVEQL
LPCLHICHSIYLRNNNISDEGIRKLLEKGMKCESFQKIALFNNNLTDACTQHFALLLKSK
QNVLSLRLGNNNITSQGAEQLAEGLSYNQSLQFLGLWGNKIGDRGAEALASALKNSTSLI
WLSLVDNGVGSAGACALAELISQTKTMKELWLNKNCISKEGVECLIEALKMNTSIKEVWL
MGNNLSPEEEEELSKQESRLTF
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcaccagttggtcctaaaacagcgagcagagcttctgacagtcctgtgtggt
ggaggaactgctgaacctctggactgtgttctggacctgctcctggcttgggaggttctt
gtctgggaggattacctaagcatacgagtggcggagaaacctctgtgttccaacgtcagg
caacttttagatgtggtgtacgagaaaggagaagatgcatgcagccttctcttagctgcg
atgaaccaggtcttacctgaggagcagaaggttgggctgtgttttgggaaagaatgtgct
gtggtgtacaaggacagaccggacacggcaactttaacactattggctgacaggccagtg
ttagtgagaaagctcagagataatattgacggagcattgaatgctttactgacaactggc
tgcttcaacattaaagactgtgatgtggtgcaactgcctgtgtacacaccctcacaacag
gttcggaggctgttagaccaagtgaggtttaaaggggaaacagctgcacagaccttacta
cagtatctagagcaaacagagccaaccagaccaaaccctgaagataaagaaaatcacctt
tctgccaatgtattgctgtaccaaaagaaactgagaagctctgttgctgcccagtcccac
tccctgagcacctacggtgggacaggacgtttctccttggatgacatttacaccgacgga
cttcttgaagtgatggatggctctggtgaaactactacgctaggactagaggatgtggtg
ggtcccttgggcactcttaatgaagatgctgacaccgttcttgtttctggagaggcagga
agtggcaaaagcacactgcttcagcgactgcacttgctttgggcaagagaagctttgctc
acaaacactttcctgctgttccccttcagttgccgcaagctgaatgcagagcacagagag
ctatctctgaaagagctcctcttcctgcactgctgctggcctgatcgaggtcaggatgag
gttttccagttcatcctagaccatcctaatttggtcctctttacctttgatgggctcgat
gagtttaaacagggtttcacggatgaagaacgccactgctgtcctactaagcaagtgcct
atacccgttttgcttttcaatctgttgcagggtacgctaatgaagggtgtaatgaaggtg
gtcactagcaggccacaggctgtggggccttcgcttaaacgttatctccgcaaagaagtg
ctcctgaagggtttttcacctggaggtattgactgctttattaagaaacatcacagcgac
cctgctatggctagacgtgtcatagagtccctccaggctaacacggtgttgctaagtctt
tgccacatcccagtcttctgctggattgtgaccaagtgccaccaggagcttctggctgga
caagatggtgttccccagactatcactgatgtgtacctcctggtcttacagcatttcttt
cagcgaaagtcatctcagtcccaaggtgtcctgggaaaggcctggttggaggaacatctg
gacacagtgataaaactcggacagctggcattcgaaggtctggaagcctcttgttatgtg
ttctcaggatatgagctacaaagaaatggactcaccgaacaggatgttggcatgggtttc
ctcatctactgcaatgacctatctgttacagattgtaaacactacgaatttctccacatc
accttacaatgcttcttctctgctctctatgttgttctaaatcgtaacagcgatcgttct
gctatctccagactctttcagcctcagtacagacagctgtcaggccggtctcaaagatgt
ctgggacactgtattgacagttctgtagaggagggggagtcccatgtgacagagacaccg
aacctccagattacagctcagtttgtgtcaggacttctatcccagcggcaccatcaactc
ttggtggaatgctgtccggcagctgtgcgagatcgcaaggccaagcaggcagtgaagtct
ttatctaaaggtatgcagagacatttcaagtcaattcctcgtcctgtagaaggtgaaaag
aagagcatgcatgccatgccaagttttgtttggctaattaagtgcatctatgaaatgcaa
gacaacagtattgctcaagataccatggctaaattggacgttgagcacctgaagctcacc
tactgtaacattggacctgtggaatgtactgcgctggcatatgtgctgaagtacctaagg
aatcctgttgggctccagttggacaacaattcagtgggagatgtgggcgtggagcagctt
cttccatgtctacatatttgtcactccatttatttaaggaacaataacatatcagatgaa
ggtattcggaaacttctggaaaagggaatgaagtgtgaaagcttccaaaaaatagcgctt
ttcaacaacaaccttacagatgcttgcacccaacactttgctttgctgttaaaatcaaag
cagaacgtcctgtctttgaggcttggaaataataacatcacatcgcagggagctgagcag
ctggcagaaggcctaagctacaaccagtctttgcagtttcttggattatggggtaataaa
attggggacaggggagctgaggcattggcatctgcgctgaaaaatagcacatcactaata
tggctaagtctggtggataatggtgtgggcagtgcaggtgcatgtgctctggctgaactc
atcagtcagaccaaaactatgaaggaattgtggctaaacaaaaactgtatcagcaaagag
ggggttgagtgtctaatagaggcactgaaaatgaacactagtattaaggaagtctggctg
atgggaaataatttgagcccagaggaagaggaggagctgagcaagcaggaaagcagattg
accttctga
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