Garra rufa (doctor fish): 141333117
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Entry
141333117 CDS
T11039
Symbol
lemd3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
141333117 (lemd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141333117 (lemd3)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
141333117 (lemd3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
DUF7475
KIND
Vpu
Motif
Other DBs
NCBI-GeneID:
141333117
NCBI-ProteinID:
XP_073694147
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Position
4:complement(14744947..14758732)
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AA seq
843 aa
AA seq
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MASAQLTDEELVTELKRLGFTPGPVTESTRPVYLKKLKKLREEQPQPRGSRSGKGRSSSG
SINSNGSSGASNSNDAARAPGFSARPPGSDVTRLSASRSEKRRAGKFVLGFSSDESDAEV
PQKKGGPNHGGSRRDRGSAQQTPTIRPAGTPATAAASLGLSVDRKSISGSPWWTDRGKFN
DLNETERDSRALNGNKAFYESNSSKLARDYSDSDEEEEEEGERERPRERRLTFRHSPSAS
SSPYRSVWSSEKTALGAHDTPDYSLDMVGERRDDDDKEQREFSGSYVSRSYPKLNTIDGH
DNRSSSIPSGSFSKNHLDNGDGESPSCSSSSRFSIGLRPRFPSYTATYRANHSNHTGSNH
SYSHASALKPKQHTTVPEDELLQQFKREEVSSTGGFSAHYLSMFLLTAACLFFVLLGLMY
LRMRGSSTSEGDAVIMQHPFGPEFDKEFGVKDRELILNLLFSLHEHLANVAGDHDCRDLK
NPLNRSVSFSDASTYLKLQNEAYENLIETSLEWVMKTKDVVGIRLIGANPDQPIEDISEI
SRLESIHPRMSFFCRLRRAFFTVIHRVLFILAGIGVVLGLVYYMKYRWRKEEEETRQMYD
MVERIIDVMRSHNEASQENKDLQQYLPIPHVRDSLVQPQDRKKMKKVWDRAVAFLSANES
RIRTETQRIGGADFMVWRWLQPSMSPDKMSSMPSKVWQGQAFPLDRRNSPPNSLTPCLKI
RNMFDPVMEVGENWHLAIQEAILEKCSDNDGIVHIAVDKNSREGCVYVKCLSAEHSGKAF
KALHGSWFDGKLVTVKYLRLDRYHQRFPQALGCNTPLKPSSSSMNSMSRLNQRSSTSSSL
GFS
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcacagttaacggatgaggagcttgtgactgaattaaaacggctcggcttc
accccgggcccggtgacggagagcacgcggcccgtgtacttgaagaagctgaaaaagctg
cgggaggagcagccacagccgcggggctcccggagcggaaagggacgcagcagcagcggg
agtatcaacagcaacggcagcagcggcgctagtaacagcaacgacgcggcgcgagctccg
ggattcagcgccaggccaccgggcagtgacgtcacgcgtctgagcgccagccggagcgaa
aagcgcagagccggaaagttcgtgctgggcttcagctcggacgagtcggacgcggaggtg
ccgcagaagaaaggaggcccgaatcacggcggcagtaggagagaccgaggatccgcgcag
cagacacccaccatcaggcctgcgggaacacccgccaccgccgccgcctccctcggatta
tccgtggacaggaaaagcatttctggatctccgtggtggacagaccgaggtaaattcaac
gatttgaacgaaacggaaagagacagtcgggctttgaacgggaataaggcgttttatgag
tcgaacagtagtaagttagccagggattactctgattcagacgaggaggaggaagaggag
ggtgaacgagaacgtccccgcgaacgccgtctgactttcagacacagtccatccgcctcc
tcttccccgtaccggagcgtctggagctcggagaagacggcgctcggcgcgcatgatact
cccgattacagtctagatatggtcggcgaacggagggacgatgatgacaaggaacagagg
gagtttagcggaagctacgtgagccgcagctacccgaaactcaacacaattgacgggcat
gacaaccgcagcagcagcatcccgtccggttctttcagcaagaaccacctcgacaacgga
gacggcgaatccccctcctgcagcagcagtagtcggttcagtatcgggctcagaccgcgc
tttccctcctacacagcgacctaccgagcgaaccactcgaaccacaccggttccaaccac
tcctacagccatgcctcagccctcaagcccaagcagcacaccacggtccccgaggacgag
ctcctgcagcagtttaaacgggaggaggtgtcctccaccggcggcttcagcgctcactac
ctgtccatgttcctcctgacagccgcctgcctgttcttcgtcctgctgggcctcatgtac
ctgcggatgaggggctccagcacctccgagggggatgcagtcatcatgcaacaccctttc
ggaccagagtttgataaggagtttggggtcaaagaccgagagctcattcttaacctgctc
ttttctctacatgagcatctggccaatgttgcaggagatcatgattgtagagaccttaaa
aatcctttaaacagaagtgtctcttttagtgatgcctctacgtacctcaagctccaaaat
gaagcctatgaaaacttgatcgaaacgtctttagagtgggtcatgaaaaccaaagatgtt
gtcggtataaggttgattggtgccaaccctgatcaacccattgaggacatatcagaaatc
tcacgcctggagtccatccacccccgcatgtccttcttctgccgcctcagacgcgccttc
ttcactgtgatccacagagttctcttcatcctcgcaggcatcggtgtagttttgggtttg
gtctattacatgaaatacaggtggcgcaaagaagaggaggaaactagacagatgtatgac
atggtggagagaatcatagatgtaatgaggagccacaatgaagcctctcaggagaataag
gatttgcaacagtacctgcccatccctcatgtccgtgactctcttgtccagcctcaagac
agaaagaaaatgaagaaggtgtgggacagagccgtcgcattcctctcagctaacgagtcc
cgcatccggacagaaacgcagaggattggaggggcggacttcatggtgtggaggtggctt
cagccctcaatgtcacctgataagatgtctagcatgccctccaaagtgtggcaaggccaa
gcatttccgttggaccgaagaaattcgccaccaaacagcttaacgccatgcttgaagatt
cgcaacatgtttgatcctgtcatggaagtgggggaaaactggcacctcgccattcaagaa
gccattttggagaagtgcagcgataacgatggaatcgttcacatagctgttgacaaaaac
tcaagagagggctgcgtttatgtaaagtgcctttcagcagagcattctgggaaagccttc
aaagcgcttcatggctcctggtttgatggtaagctggtgacggtcaagtacctacgcctg
gatcgctaccaccagcgtttcccacaagccctgggctgcaacacgcccctcaagccttcc
agctccagcatgaacagcatgtctcgcctgaaccagcgatccagcacgtccagctcactg
gggttctcttga
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