Garra rufa (doctor fish): 141333364
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Entry
141333364 CDS
T11039
Symbol
mdm2
Name
(RefSeq) E3 ubiquitin-protein ligase Mdm2
KO
K06643
E3 ubiquitin-protein ligase Mdm2 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04068
FoxO signaling pathway
grf04110
Cell cycle
grf04115
p53 signaling pathway
grf04120
Ubiquitin mediated proteolysis
grf04144
Endocytosis
grf04218
Cellular senescence
grf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141333364 (mdm2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
141333364 (mdm2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141333364 (mdm2)
09143 Cell growth and death
04110 Cell cycle
141333364 (mdm2)
04115 p53 signaling pathway
141333364 (mdm2)
04218 Cellular senescence
141333364 (mdm2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
141333364 (mdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141333364 (mdm2)
04121 Ubiquitin system [BR:
grf04121
]
141333364 (mdm2)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141333364 (mdm2)
Membrane trafficking [BR:
grf04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
141333364 (mdm2)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
MDM2/MDM4 proteins
141333364 (mdm2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
SWIB
Zn_ribbon_RanBP
zf-RING_2
SWIB_eIF2D
DUF7130
Motif
Other DBs
NCBI-GeneID:
141333364
NCBI-ProteinID:
XP_073694448
LinkDB
All DBs
Position
4:24817082..24824410
Genome browser
AA seq
484 aa
AA seq
DB search
MATESCLSSSQINKVDNEKLVRPKMQLKSLLEDAGADKDVFTMKEVMFYLGKYIMSKELY
DKQQQHIVHCGEDALGAVLGVKSFSVKEPRALFAMINRNLVTVKSPDIQSTFSEPRSQSE
PDRGPGDTDSDSRSSTSQQRRRRRSSDPESTSAEDEPRERRKRHKSDSFSLTFDESLSWC
VIGGLHREKVNSESSDAQSNSDVGISHSEGSDESEDSDSDSDNFSVEFEVESIDSDAYSE
NDEDSLPGENEVYEVTIFAEEEDSFDEDTEITEADYWKCAECGELNPPLPRHCKSCWTVR
PGWLPETHSDLENTSTNTQPSTEDTSITTTLNSASDDKLLPSKPSSPLPETDEGVDVPDG
KCSQSPNAAKDELLFSTPSGSMTDSQTSSSQPSSSQPSTSSGGGSSQEETPELERYNSLE
ACLPAACLEPCVICQSRPKNGCIVHGRTGHLMACYTCAKKLKNRNKLCPVCREPIQSVVL
TYVS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagaaagttgtttaagcagttctcagatcaacaaggttgacaacgaaaaactg
gtaagaccaaagatgcagctgaaaagcttgttagaagatgcaggtgcagataaagatgtt
ttcaccatgaaggaggttatgttttatttggggaagtatatcatgagcaaggagttatat
gacaagcagcagcaacacattgttcactgcggagaggatgctcttggtgctgttctcggg
gtgaaaagtttctcagtcaaagagccccgagccctctttgcgatgatcaacagaaacctt
gtgacagtgaaaagtccagatattcagtctaccttttctgaacccaggagtcaaagtgaa
ccagatcgagggcctggggatacggattcagactctcgctcatctacctcacagcagcgc
aggaggaggagaagcagtgatcctgagagtacttcagcggaagacgagcccagagaacgt
aggaagaggcacaagtcagacagcttctccttgacatttgacgaaagcctgtcttggtgt
gtaataggcggcctgcatcgggagaaggtgaacagcgagtcttcggacgcacaaagcaac
tctgatgtaggtatttctcacagtgagggcagtgatgaaagtgaagactcggattctgac
tctgataactttagtgtggaatttgaggtggagtccatagactccgacgcctacagtgag
aacgatgaggattcattgccaggagagaacgaggtgtatgaagtcacaatctttgctgag
gaggaagattcgtttgatgaggataccgagataactgaggcagactactggaaatgtgcc
gaatgtggtgagctcaaccctcctcttcctcggcattgcaaaagctgctggaccgtccga
cccggatggcttccagaaacacactccgacttggaaaacacctccactaacactcaaccc
agcacagaagacaccagcatcaccacaactctgaactcagcctcagatgacaaactgctt
ccttccaaaccctcaagcccacttccagaaacagatgaaggagtggacgtacccgacggc
aagtgctcgcaatctcctaacgccgctaaagatgaacttctcttctccactccctctggc
tccatgactgactctcagacctcatcatcccagccttcctcatcgcaaccatcaacctcc
tctggtgggggcagcagccaggaagagaccccggagctagaacgctacaacagcctggag
gcctgcctacccgccgcttgccttgagccctgcgtcatctgtcaaagtcgccccaagaac
ggctgcatcgtccacggaagaactggacaccttatggcttgctacacttgcgccaagaaa
ctaaagaaccggaataagttgtgtccggtgtgccgagagcccattcagtcagtcgttttg
acctacgtgagctga
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