Garra rufa (doctor fish): 141333734
Help
Entry
141333734 CDS
T11039
Symbol
cacna2d1a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1a
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04260
Cardiac muscle contraction
grf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141333734 (cacna2d1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
141333734 (cacna2d1a)
04261 Adrenergic signaling in cardiomyocytes
141333734 (cacna2d1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141333734 (cacna2d1a)
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
141333734 (cacna2d1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
SOAR
MCP-like_PDC_1
FdsD
Motif
Other DBs
NCBI-GeneID:
141333734
NCBI-ProteinID:
XP_073694950
LinkDB
All DBs
Position
4:complement(21206829..21356849)
Genome browser
AA seq
1081 aa
AA seq
DB search
MSLRRIMDALRLSAALLLLLSLFSSGSAIQFPDSHLTRKWAMQMQEELVQLIDAETGIQK
LQKIFQQFQRHYVVKQNNATQLVAKAARGIEKLLANRSKALEALATAAESLQKEHQWKDD
LDVNDTIYYNAKDKFDINDTETHQNRFKLDFKEDPAFKRPVSYNATAVHIPTDIYEGSTI
ILNELNWTAALDDVFKKNKEDDPSLLWQVFGSATGLARYFPASPWVDTRSTPNKIDLYDV
RRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNIVSFNNSA
KSVACFENLVQANVRNKKILKEAVQKITANGTTDYKIGFKEAFDQLSSMNVSRANCNKII
MLFTDGGEDKASEIFEEYNSDKKVRIFTFSVGQHNYDKTPIQWMACNNKGYYYEIPSIGA
IRINTQEYLDVLGRPMVKEDKKAKTVQWTNVYVDALELGLVITGTLPVFNKTRSSLPKNK
APSQLILGVMAIDVSLDDIKRLTPHYTLGPNGYYFAIDPNGYVLLHPNLQPKDLKSQEPV
TLDFLDAELEDEVKVEIRRSMIDGQKDQKRFQTLMKSQDERYIDRGTRTYTWGPVHVTDY
SLALVLPDYSISYIKATIADTITQAKFSESLQVDKFEEYGYTLIAPRDYCTDLKAQSDNI
TQFLIDFNEYIDRKTPNNPLCNMELINRLLLDAGITAELAKLWNEQGLNERIKAKFVATD
GGVTRVYPASAGSEWTEEAETYKSSFYKRSLDNDVYVVTAATYAMNTSQDSVLVSRAMDL
RVDEFSLKPAVVGVKLDIQTWMESFINATITPKCVGEICGCRRDDVNLDCFLLDDGGFLV
MTNKYPYIDKIGQFFGMIEPSLMRNLINETLFSVNITYDYQALCEPTKESKAAAGLRSVY
VPTIADILNIGWWASAAAWSILQQLFVSITFPNFLEAADVDDDLSEIPSKESCIKEQKQY
FFENNETTFKGTVDYQNCSRQFIAEKLPKTNLVLIVADTKGCQPDEKYFSQEEKPSPGPD
PCIIAHNPRYRKGPTQCFDNNISEQNEDCGGALGLSPSIVSMVILQLPLLWLLIGRGHCL
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcagaagaataatggatgcgctcagattgtccgctgctcttcttctacttctg
tctttattcagctctggaagcgccatacagtttccagactcccatctgacccggaaatgg
gcgatgcagatgcaggaggagctagtgcagttgatcgatgctgagaccggcatacaaaag
ctccaaaaaattttccagcaatttcagagacactatgttgtgaagcaaaacaacgctaca
caactggtggcaaaagctgcacgtggaatcgagaaacttcttgccaaccgttccaaagct
ctagaggcactggcgacggctgcggagagcctgcagaaggagcaccagtggaaggacgat
cttgacgtgaatgacaccatctactacaatgccaaggacaagtttgacataaatgacacg
gaaacacaccagaaccgcttcaaactagatttcaaagaggatcctgctttcaaacggcct
gtttcgtacaatgcaacagcagtgcacattcccactgatatctacgagggctccactatt
atcctgaatgagctaaactggactgcggctctggatgacgtctttaagaagaacaaggaa
gatgacccgtcccttctctggcaggtgttcggcagtgcgacaggcctggctcgatacttc
ccagcatccccttgggttgacacgaggagcacaccaaacaagattgacctgtacgatgtt
cgccgaaggccctggtatatccaaggtgcagcttcacctaaagacatgttgatcctggtg
gatgcgagtggaagcgtgtcaggtctgacactgaagctcattcgcacttccgtcagtgag
atgctggagactctctccgatgatgattacgtcaacatcgtctctttcaacaattcagcc
aagtcagtcgcctgctttgaaaacctggtccaagcaaatgtccgcaataagaagattctg
aaggaagcagtccagaagatcacagcaaatggcaccactgactacaaaatcggcttcaag
gaggcttttgaccagctttcttcaatgaatgtttcaagagcaaactgtaataagatcatc
atgctatttactgacggaggggaggacaaagcttcagagatctttgaggagtacaactct
gacaagaaggttcgaatcttcaccttttctgtgggccagcataactatgataagacgcca
attcagtggatggcttgcaataacaaaggttattattatgagatcccatctattggagcc
atcaggatcaacacccaggagtatctggatgtcttgggcagacccatggtgaaagaagac
aagaaagcaaaaactgtgcagtggaccaacgtttacgtggacgctctggaattgggcctt
gtgattacaggcactctgccagtgttcaataaaaccaggagcagtctacctaagaataag
gccccgagccagctgattttgggggtgatggccatagacgtgtctctggacgacatcaag
agactgactcctcattacactctcggaccaaacggctattacttcgccatcgatcccaac
ggctacgtgctacttcatcccaaccttcagccaaaggatctcaagtctcaggaacccgtg
acgttggacttcttggatgcagaactagaggatgaagtgaaagtggagatcagaagaagt
atgattgatggacagaaggatcaaaagagattccaaacactaatgaagtctcaagatgag
cgttacatagacagaggcaccagaacctacacttgggggccagtccatgtcaccgactac
agtctcgctttagttctaccagattacagtatcagctacatcaaggccactatagcagac
accatcactcaggccaaattttctgaaagcctgcaggtggacaaattcgaagagtatgga
tatactttaatagcacccagagattactgcacagacctgaaagctcagagcgacaacatc
acacagttcctcatcgacttcaatgaatacattgacagaaagacccctaacaacccgctg
tgtaatatggagttgataaacagactgctgctggatgctggcatcaccgctgaactggcc
aaactctggaacgaacaggggctgaatgagagaatcaaggctaagtttgtggcaacggac
ggcggtgtcactagagtctatcctgcgagtgctggttcagaatggaccgaagaggcagaa
acatacaagtctagtttctacaagagaagtctggacaatgatgtttatgtagttacagca
gcaacatatgcaatgaacacatctcaagattcagttttagtgagcagagccatggacctg
agagttgatgaatttagcctaaaaccagcagtggttggtgtaaaactggatatacagact
tggatggaaagtttcatcaatgctacgattacgcccaaatgtgttggtgaaatctgtggg
tgcaggagggacgacgtgaatctggactgctttcttctggacgatggaggcttccttgtc
atgaccaataagtacccctatatcgataagattggacagtttttcggtatgattgaaccc
agcctaatgagaaatctgataaacgaaaccctgttctcagtcaacataacctacgactac
caggccctctgtgaacccaccaaagaaagtaaagccgccgctggtctcagatcagtctat
gtgcccaccatagctgacattctcaacattggttggtgggcttctgcagcagcctggtca
atattgcagcagttgtttgtcagcatcacatttcctaatttccttgaagcagcggacgta
gacgatgacctgtctgaaataccatctaaagagagttgcattaaagagcagaaacagtat
ttctttgagaacaatgagacaacttttaaggggactgttgattatcagaactgctccagg
cagttcatagctgaaaagcttccgaagacaaatctggtgcttattgttgcagacacaaaa
gggtgccagcctgatgaaaaatatttttcccaggaagaaaagccttctccaggaccagat
ccctgcataatagcccataacccacgttatcggaaaggtccgacacagtgctttgacaac
aacataagtgaacagaacgaggattgcggtggggcgttgggtctgagtccatcgatcgtg
tccatggtcatcctccagctgccgttgctctggcttctgattggacgaggacactgcctc
tcatga
DBGET
integrated database retrieval system
