KEGG   Garra rufa (doctor fish): 141333831
Entry
141333831         CDS       T11039                                 
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
  KO
K23611  guanine nucleotide exchange protein SMCR8
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:grf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    141333831 (smcr8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:grf04131]
    141333831 (smcr8a)
Membrane trafficking [BR:grf04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    141333831 (smcr8a)
SSDB
Motif
Pfam: Folliculin ERM_helical
Other DBs
NCBI-GeneID: 141333831
NCBI-ProteinID: XP_073695083
LinkDB
Position
1:complement(32528594..32535351)
AA seq 859 aa
MIGSPDVVAFTKEDDFGDSFSDPWSLPEEFSVPLFAHTANANPWTKTSYAKFPKDFILIS
EFSEQVGPQPLLTIPNDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSNYPKLNFVEDS
KVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADERKIMHQFQEMSAEFSKASE
FLKSGNRRAFANELEKKLKDLEYTRSVLHKEAELQKMNNGCYSTQAIEKANELANMEKSI
YEHRDLLRQITSYPSRKKKDADFVQRETEKPADMNVVDDTVNLNHSDTGDKTVETESESR
KSSYTPQLIKAKSAKCFDKRLKTMEELCDASFFHQTLEQLNLIEKSFRGDLCLIYTSQID
KALLSKQRVTSFLFEAERDRECEGTSKNLNISSNNPIVPILNLSGEPMSLESYTTCIDVD
HIKPGVESMEGPHESSTSDITQETSEAADTETKGSFSSDKSIEAFGSVSPSSLHVNFFDG
LERKSKVSIASPSENASKSIAVPPRTSDGNLVPMDAACCIGQDGFIFDEPLPELAQECCS
DTVVNQEPLSFLQGDPALQMDYILEDSESPNMGLTFSELNATVLSEEVAKINIEDVSDST
SFMSASTSSDRAMSPFIYGSALTLKQKKKAGHSALRFIRQYPFAQQAIFCLLSGRTLVIL
GVDEGTVRKLVNALFIFVPNLGKYGETVQPWLSSPFQLTDLQRWKLIGLQRAASPPGSSI
LHSLNRYSRYISILDCDSKTLRCPPYKGTLISHLADHRTQIKRGSTYFLHVQGMLTQLTA
KAFLYTFCHHIHLPMDVNDQGSVTTRRTNFLLQLGYTVEESKIVQYLSELIKQHYLQGSP
KGVNPSFCFNYTTSYLYKI
NT seq 2580 nt   +upstreamnt  +downstreamnt
atgattggctcaccagatgtggtggcttttaccaaagaagatgactttggagactcgttc
tcggatccgtggtcgcttccagaggagttttctgtgcctttgtttgctcacactgccaat
gcaaatccctggacgaagacatcctatgcgaaattcccgaaagatttcatactcatctct
gaattttctgaacaggtcggtccacagcctttactcaccattcccaatgatcccaaagtg
tgtgggacgtttgaccttaactacttctcgcttcgcatcatgtctgttgactaccaggca
tccttcgtcggacaccctcctgggagtaactacccaaagcttaattttgtggaggactcg
aaagttgtcctgggtgattccaaggaaggggcgtttgcgtacgtccatcatctgacgctg
tatgatttggaggctcgtggatttgtacggcccttttgcatggcctacatctcagcagat
gagaggaaaatcatgcatcagtttcaagaaatgtcagctgagttttccaaggcatctgaa
tttttaaaatcaggaaaccgaagggcttttgcaaatgaattggaaaagaaactgaaagac
ttggagtacaccagatcagtgctgcacaaagaggccgaactgcagaaaatgaacaatggc
tgttattcaacccaagctattgagaaggcaaatgaattggcgaatatggagaagtccatc
tatgaacacagagacctgctgaggcaaatcacttcttatccttccagaaaaaagaaagat
gcggattttgtacagcgtgagacggagaaaccagctgacatgaatgtggttgacgatacg
gtgaatttgaatcattctgacactggagataagactgttgaaaccgaaagcgagagtaga
aagtcctcttacacgcctcagctcattaaggccaagtctgcaaaatgctttgataaacgc
ttgaaaacaatggaggagctttgcgacgccagcttttttcaccaaactctagagcaacta
aacctaattgaaaagtcattccgaggagatctatgcttaatttacactagccagattgac
aaggctcttctgagcaaacagagagttactagctttctcttcgaagctgaacgtgaccgg
gagtgcgagggaacctcgaagaacctcaatatttcttccaacaatccaattgtccccatt
ctgaacttatccggcgagccgatgagtcttgaatcgtacaccacctgcatagatgtagat
cacattaagccaggtgtggagtctatggaagggcctcatgagtctagtacatctgacatt
acgcaggaaacctcagaggccgccgacacggagaccaaagggagttttagtagcgacaag
agcattgaggcttttggaagtgttagtccctctagcctacatgtgaatttctttgatggt
cttgaaagaaagagcaaggtatccattgcatctccatctgaaaatgcatccaagtctatt
gccgtcccaccaaggacgtctgatggcaatctagtcccgatggatgcagcctgctgtatt
ggacaggacggtttcatttttgatgaacctttgcctgagcttgctcaggagtgctgcagc
gacacagtggtgaaccaagaacctctgtcttttcttcaaggagaccctgccttacagatg
gactacattttggaggactcagagagcccaaacatgggactgactttttccgagctaaac
gctactgttctttccgaggaggtggcaaaaattaatattgaagatgtctccgatagtaca
agcttcatgagcgcctccaccagttctgatcgagccatgtctccgttcatctacggcagt
gcattgaccctaaaacaaaagaagaaagctggtcacagtgctcttcgattcatcaggcaa
tacccgttcgctcagcaagccattttctgccttctgagtgggcgaacacttgttatttta
ggggtggacgaaggcacagtgaggaagctggttaatgctttattcatcttcgtgcctaat
cttggcaagtatggtgaaaccgttcaaccgtggctttcatcaccatttcagctgaccgac
ctgcagagatggaagcttattggattgcagagagctgcctccccgcctggatccagcatt
ctccactctttgaatcgatacagccgttacataagcattttggactgtgacagcaagacc
ctccggtgtccgccgtacaaaggaacactaataagccatttggcagaccacaggactcag
atcaaacgcggcagtacctacttcctccatgttcagggtatgttgactcagcttacagcc
aaggccttcctttacacgttctgccatcacattcaccttcccatggacgtcaacgatcag
ggctcggtaacgacacgcaggactaatttcttgttgcagctcggctacactgtggaggag
agcaaaatcgtccagtacctgagtgagctcattaagcagcattaccttcaggggtctccg
aagggggtcaacccatctttttgttttaattacaccaccagctatttgtacaaaatctga

DBGET integrated database retrieval system