Garra rufa (doctor fish): 141334514
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Entry
141334514 CDS
T11039
Symbol
sptbn2
Name
(RefSeq) spectrin family protein isoform X1
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04517
IgSF CAM signaling
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
141334514 (sptbn2)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141334514 (sptbn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141334514 (sptbn2)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
141334514 (sptbn2)
Intermediate filaments
Intermediate filament-binding proteins
141334514 (sptbn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
SOS1_NGEF_PH
PH_17
Motif
Other DBs
NCBI-GeneID:
141334514
NCBI-ProteinID:
XP_073695717
LinkDB
All DBs
Position
5:complement(27757657..27817086)
Genome browser
AA seq
2392 aa
AA seq
DB search
MSTISPTDFDSVEIQQQYNDINNRWDIAAETEWDNENSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLGRVTCRIGDLYTDLRDGRMLIRLLEVLSGEQLPKPTKGRMRIHCLENVD
KALQFLKEQKVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKD
ALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRSDLIDFDNLKRSNAHYNLQNA
FNVAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRIGKVLDYA
IEADQLIEKYETLASELLQWIEQTIVTLNDRQLANSLSAVQNQLQAFNTYRTVEKPPKFT
EKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQ
EKLEMLAARFDRKAAMRETWLSENQRLVSQDNFGVELGAVEAATRKHEAIETDIQAYGER
VAAVESVARELEAEGYHEVRRILARRDNVLRLWEYLKELLASRRERLIAHRDLQRLLQEM
SYIMDWMEDMKSRLQSQDSGKHLHDVEDLLQKHTLVEADISAQAERVKAVQAAAKRFTSD
EQNYKPCDPTLVEEKVDLLGRAYGELGQLAADRRARLDDSRRLWQFLWELGEEAAWIREQ
EQILSGGDYGKDLTSALHLLSKHEAFRDEMAARYGPLGNSIAGGETLVKEGHFGAPEVTE
RIKDVRAQWSHLEEVSQLHEQGLKESVAFHQFQTDANDMEAWILETLRLVSSQEVGHDEF
STQTLARKQREVEEEIQSHRSLIDSLHEQASTLPEAYAQSPQVEGRLPAIEQRYEELEWL
SSSWRQALDGALALYRMFSEASACQLWVGEKEQWLHNMEIPTKLEDLEVVQQRFETLEPE
MNTLGARISDVNQVAQQLLGSDNRNKEQIDQTQNQLNNRWSDFQSLANQRKQALESALNI
QNYHLECNEIKSWMKEKTKVIESTQSLGNDLAGVMALQRKLTGMERDLEAIQGKLDDLRS
EAEKLASEHPEQEEEIKGRLAEIQEVWEELRATMKRREESLGEASKLQGFLRDLDDFQAW
LSRTQTTVASEDTPTSLAEAERLLGQHEAIKNEVDNYREDYEKMRATGAEVTQGQTDAQH
MFLAQRLQALDTGWHELRRMWESRHCVLAQAFDFQTLLRDAKQAEGFLNSQEYVLSHTEM
PSSLQGAVEAIKKHEDFLTTMEANEEKINSVVESGRRLMSDGNTYADKIQEKTDSIQERH
QKNKEASNELLAKLKDNRELQHFLQDGQELTLWINEKMLTAQDMSYDEARNLHSKWQKHQ
AFMAELASNKDWLDKIDKEGKVLVKEKPELEQTVSETMSSLQKQWEELESTTQAKAQCLF
DANRAELFTQSCSALDSWLQNLSSQLQSDDFGKDLTSVNILLKKHQMLEHQMEVREKEVQ
SLQTQALALAQEDSGIMEVDGQQRRVTDSFSQLQDPLKERRQRLLASKEAHQFNRDLEDE
ILWVKERMPLATSTDHGKDLPSVQLLIKKNQTLQKEIQGHQPRIDDIQAHGRSMSPGKES
EMDRERRTALDGRLAELRELWALLISETEQRNLRLEEANRAQQFYADAAEAEAWMGEQEL
HMMSEEKAKDEQSALVMVKKHQILEQALEDYAQTIHQLANSSRLMVNSEHPESERITLRQ
AQVDKLYAGLKDLAEERRGKLQERLRLTQLKREVDDLEQWIAEREVVAGSHELGQDYEHV
TMLRDKFREFARDTSTIGQERVDAVNAQADELIESGHPENASVAEWKDGLNEAWADLLEL
IDTRTQMLAASYELHRFHQDAREALGLIREKKETLAGAELGRDLNTVQHLLRQHTAYEHD
VQALSGQVTQVQDDAARLQKAYAGEKADEIHRHERAVTEAWEGLQSATQARRLLLLDTVE
KFRFLNMVRDLMLWMEGINLQIQSHDSPRDVSSAGLVIANHQDIKSEIETRADSFTACSE
MGRTLINNNHYASDEIQEKLDQLQAKRTEINQKWQEKMDHLQIVLEVLQFSRDASMAESW
LAGQEPLVRAAELGSNVDEVESLIKRHEAFEKLAAGWEDRFTQLEKLTTLEEQEIQRRKE
EEERARRPPTPPPVEEVVQSEINDSAARTSLDQTTLNQSVSVNGVYSDQDTSQSLSVSVS
ELKKPEPKPESKPQSNPVSKPVPKPNKAQERGSESESVNGPGRDSGLDSASRQDPSATLP
GRGAEATTEAMEGILCRKQEMESHNKKAGTRSWQNVYCVLRKGSLGFYKDNKSASNGIPY
HGEVPISLNEAVCEVAHDYKKRKHVFKLRLGDGKEYLFQAKDEAEMSSWIRAIQSSMSSA
ERSPGGTRGLSRAMTMPPMSPSSGEAGGVTMRNKDGKERDREKRFSFFGKKK
NT seq
7179 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatctcaccgactgattttgacagcgttgagatccagcagcagtacaacgac
atcaacaaccgctgggacatcgcagctgaaacagagtgggataatgaaaacagttctgca
cgtctgttcgaacggtcccgcattaaagctctcgcagatgagagagaagcagtgcaaaag
aagacctttactaaatgggtgaactctcacctgggccgtgtgacctgccggatcggtgac
ctctacactgacctccgcgatggacgtatgcttatccgactgctggaggtcctctctggg
gagcaactgccaaagcccaccaagggccgtatgcgcatccactgcctggaaaacgttgac
aaggctctgcaattcctgaaggaacaaaaggttcatctggagaatatgggttctcacgac
attgttgacggaaaccaccgcctcacacttggactcatttggaccataatcctccgcttc
cagatccaagacattagcgttgagacggaggacaacaaagagaagaaatcagccaaagat
gctctgctgctgtggtgtcagatgaagactgcagggtacccaaatgtcaatgtccacaac
ttcaccacaagctggagagatggtctagcgttcaatgccatagtgcacaaacacaggtca
gacttgattgactttgataatctcaagcgctctaatgcccattataacctgcagaatgcc
tttaatgtggcagagaaggagctgggtcttaccaagctgctggatccagaggacgtaaat
gttgatcagcctgatgaaaagtccatcatcacatatgtggccacatactaccactacttc
agcaagatgaaggcgctcgccgtagagggcaagagaatcggcaaggtgctggactatgct
atcgaagcagatcagctgatagagaaatatgaaaccctggcctcagagctgctgcagtgg
attgaacaaaccatcgttacccttaatgaccgtcagctcgctaactcgctgagtgcggtt
cagaaccaactacaggccttcaacacataccgcactgtggagaaaccacctaaattcact
gaaaagggaaatttggaggttttgctcttcaccattcagagtaaaatgagagcaaacaat
cagaaagtctacatgccacgagagggaaaactcatctctgacatcaacaaggcatgggag
aggctggagaaagcggaacacgagagggagttggcactgagaaatgagctgattcgtcag
gagaagctggagatgttggctgcacgttttgaccgcaaagcagccatgagagaaacctgg
ctcagcgaaaaccagcggctggtctcacaggacaattttggtgttgaactgggtgctgtg
gaagcagccactcgcaaacacgaggccattgagacagacatccaggcgtacggtgagcgc
gtagcagccgtagaatctgttgctcgagaactggaggcggagggatatcatgaagtgcgg
cgcatactggcacggagggataacgtcctcagactgtgggagtatctgaaggaattactt
gcgtcacggcgagagaggctgatagcacacagagacctgcagcgcctcctacaggagatg
agctacatcatggactggatggaagacatgaagagtcgtctgcaatctcaggacagtgga
aaacaccttcatgatgtggaggacttgctgcagaaacacacacttgtggaagctgatata
tccgcacaggctgagcgagtcaaagctgtgcaggccgctgcgaagagatttacgtcagat
gaacagaattataagccatgtgaccccactctggttgaagagaaggtggatcttctgggc
cgagcgtatggagaactgggccagctggcggcggatcgacgagctcgactggacgactcg
cgaaggctgtggcagttcctatgggagctgggagaggaggccgcctggatccgagagcaa
gagcagattctgtctggaggagactacggaaaggacttgacctctgctcttcacctcctg
tctaaacatgaggccttcagagacgagatggcagcccggtatggccctctggggaacagc
attgctggtggagagaccctggtgaaggaaggccactttggagcacctgaggtgacagag
cgaatcaaggacgtgagagcacagtggtcgcacctggaggaggtttcacaattgcatgag
caggggctgaaagagtctgtagctttccatcagttccagacagacgctaacgacatggag
gcctggatactggaaacactaagactggtgtctagtcaagaagttggccacgatgagttt
tctacacagactctggccagaaagcagagagaggtggaggaggagattcaaagtcaccga
tcactcatcgactcactacatgaacaggcctcaacactgcctgaagcatatgcacagtct
ccacaggtggaaggccgtctcccagcgatagagcagcgctatgaagagttagagtggttg
tcgtcgtcatggcgacaggccttagatggtgcgcttgcgttgtatcgcatgtttagtgaa
gccagtgcctgccagctgtgggttggagaaaaagagcagtggctgcacaacatggagatt
cccaccaaattagaggatctggaggtggtccagcaaaggtttgaaactctggagccagag
atgaacacactgggtgctcgcatttctgatgtcaatcaagtggctcaacagctgcttgga
tcagacaaccgcaacaaagaacagattgaccagacacagaaccaactcaataacaggtgg
tctgatttccagagtctggctaaccagcgcaaacaagctctagaatcagcattgaatatc
cagaactatcatctagagtgtaatgaaatcaagagctggatgaaggagaagaccaaggtc
atagagtcaacacagagccttggaaatgacctggctggagtcatggccctgcagcgtaag
ctcactggtatggaaagagacctggaggctatacagggtaagctggatgacctgcgttct
gaggctgagaagttggcatctgagcaccccgagcaggaggaggagatcaagggtcgactg
gctgaaatccaggaggtgtgggaggagcttcgagccaccatgaaacggcgcgaggagtcg
ttgggcgaagcctctaagcttcagggcttccttagagatctcgatgacttccaggcctgg
ctgtcacgtacacagaccaccgtggcatccgaggacacacctacatctctggcggaagca
gagcgtctgctgggtcaacatgaggccataaagaatgaagtagataattacagggaagat
tatgagaagatgagagctactggagctgaggtgactcagggacagactgatgcccagcac
atgttccttgcccagaggttgcaggcgttggacactggctggcacgagctgaggagaatg
tgggagagccgccactgtgtcctcgctcaagcctttgatttccaaaccttgctacgagat
gcaaaacaggcagagggcttccttaatagccaggagtatgttctgtcacacacagaaatg
ccctccagcctacaaggggctgtggaggccatcaagaaacacgaagacttcctcaccacc
atggaggccaatgaagaaaagatcaacagcgtggtcgagtctggacggagactcatgtct
gacggcaacacctatgcagacaagatccaggagaagacagactctattcaggagagacac
cagaagaacaaagaagcttccaatgagctgctggctaaactgaaggacaacagagagctg
cagcatttcctacaggatggacaagagctgactttatggataaatgagaaaatgttaaca
gctcaggacatgtcctatgatgaggctagaaacctccacagcaagtggcagaaacaccag
gccttcatggctgagctggcctctaataaagactggctggacaagattgacaaggagggt
aaggtgttagtaaaggagaaacctgagctggagcagacggtatcagagactatgagcagc
ctgcagaagcagtgggaggagctagaaagcaccactcaagccaaagctcagtgtctgttt
gacgctaaccgagctgaacttttcacgcagagctgctcagcgctggactcctggctccaa
aacctgtcctctcaactccaaagcgatgactttggaaaagatctcaccagtgtcaacatc
ctgctcaagaaacaccagatgctggagcatcagatggaggtgcgtgagaaagaggtccag
tctctgcagacgcaagctctggccttggcccaagaggattctgggataatggaggtggat
gggcagcaaagaagggtgacagacagcttctctcaactgcaggaccctctaaaagagcga
aggcagcgtctccttgcttcaaaagaggctcatcagttcaacagagaccttgaggatgaa
attttatgggtgaaggagaggatgcctctcgccacgtccacagaccacggtaaagatctg
cccagtgtccagctgctcatcaaaaagaatcagactctgcagaaagagattcagggtcat
cagccccgtattgatgacatccaggctcatggaaggagcatgtcccctggaaaggagtca
gagatggacagggagaggagaactgctcttgacgggcgtctggcggagttgagggaattg
tgggcccttttgatttctgagacggagcagaggaacttgaggctagaagaggctaaccga
gcgcaacagttttacgcagatgctgcagaggctgaggcctggatgggagaacaagagctt
catatgatgtcagaagaaaaggcaaaggatgagcagagtgctttggtgatggtgaagaaa
caccagattttggagcaggctctagaggactacgctcaaaccatccaccagctggccaat
agcagcagactcatggtgaatagtgaacacccagagagtgaaagaatcactctaaggcag
gcccaggtggataaactgtatgcagggttgaaggatctggcagaagagaggagaggcaaa
ctgcaggaaagacttagactaacccagctgaagagagaagtggatgatttagagcagtgg
atcgctgaaagagaggttgtcgctgggtctcacgaactcggacaagactacgaacatgtg
acgatgttgcgtgataagttccgggagtttgcacgggacaccagcacaattggccaggag
cgtgtggatgcagtgaacgctcaggcagatgaacttattgagtctggtcatccagaaaat
gccagtgtggctgagtggaaggatgggctcaatgaggcctgggccgacctgctcgagctc
atcgacacgcgtacacagatgcttgctgcctcatacgagctgcaccgctttcatcaggac
gcccgggaagctctggggctcatacgagagaagaaggagaccctagcaggggctgaactt
ggacgggacttgaacactgtccagcacttgcttagacagcatacagcatatgagcatgat
gtgcaggcactcagcgggcaggtcacacaggttcaggatgatgctgcacgtctgcagaaa
gcgtatgctggagagaaagctgatgaaatccatcgtcacgagcgggcagtcacagaagcc
tgggaggggcttcagtctgccactcaagccagacggctgcttctactggacacagtggag
aagttcaggttcttaaacatggtcagagacctcatgctgtggatggagggaatcaactta
cagatccagtcacatgacagcccaagggacgtctcctcagctggtctggtcatcgccaac
catcaggatattaagtctgagatcgagacgagagcagacagctttactgcatgcagtgaa
atgggacgcaccctcatcaacaacaaccactatgcttcagatgagattcaagagaaattg
gatcagcttcaggccaaacgcactgaaattaatcagaagtggcaagagaaaatggaccac
ttacagatcgttctggaggtgttacagttcagcagggatgcgtctatggccgagtcgtgg
ctggctggacaggagccactggtcagggcagcagaattgggctctaacgtagacgaggtt
gagagtcttatcaaacgccacgaagcctttgaaaaactggctgcaggctgggaagatcgt
ttcacacagctagagaagctcaccacgctggaggaacaggaaattcaaagaagaaaggaa
gaggaagagagggccagacgaccacctacacctccccctgtggaggaggtagtacagtct
gagataaacgattctgctgcaaggacgagtctggaccagactacactgaaccagtccgta
tctgtcaatggtgtctacagtgaccaggacacatcacagtcgttatcggtctctgtatct
gaactcaagaaacctgaacctaaaccagagagtaaacctcagtctaacccagtttctaag
cctgtgcctaaacccaacaaggcacaggagcgtggatcagaatcagaatctgttaacggt
ccgggccgtgacagcggtctggactctgcatcacgacaagacccttcagcaacactgcca
gggcgaggagcagaagcgaccacagaagcaatggagggcatcctttgcaggaaacaggaa
atggaatcgcacaacaaaaaagcaggcaccagatcgtggcagaatgtatattgcgtattg
cgtaaaggaagtctgggcttctataaggacaacaagagtgcctcgaatggaatcccctac
cacggagaagttcccatcagcctcaatgaagccgtctgtgaggttgcacatgactacaag
aaaagaaaacatgtatttaaacttaggcttggggatggaaaagagtacctgttccaagca
aaggatgaggctgagatgagttcatggatacgagcaatccagtcatccatgtcgtccgcc
gagcgctcgccgggtggcacacgaggtctgagtcgggcgatgaccatgccgcccatgtct
cccagctcgggcgaggcgggaggtgtgaccatgcgcaacaaagacggcaaagagagagac
cgcgagaagcgcttcagtttctttggcaagaagaaataa
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integrated database retrieval system
