Garra rufa (doctor fish): 141334655
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Entry
141334655 CDS
T11039
Symbol
pbx3a
Name
(RefSeq) pre-B-cell leukemia transcription factor 1 isoform X1
KO
K15610
pre-B-cell leukemia transcription factor 3
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141334655 (pbx3a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
141334655 (pbx3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
HTH_NDX
bpX4
EF-hand_2
DUF7260
LZ3wCH
Motif
Other DBs
NCBI-GeneID:
141334655
NCBI-ProteinID:
XP_073695933
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Position
5:52425481..52496548
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AA seq
461 aa
AA seq
DB search
MEEQSHLMQTLGGVTLTGHPVALTLPLDGTDARNKQDIGDILHQIMTITDQSLDEAQAKK
HGLNCHRMKPALFSVLCEIKEKTGLSIRGSQDEDPADPQLMRLDNMLLAEGVSGPEKGGG
AAAVAAATAAVGVGADNSIEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQ
SRTRPISPKEIERMVNIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATE
ILNEYFYSHLSNPYPSEEAKEELAKKCAITVSQGKGSTITVSQVSNWFGNKRIRYKKNIG
KFQEEANLYAAKTAVTAAQAVAAAVQNSQTNSPATPSSGFQMKDEDFQLDAAEDKNNLLN
NMFTGSSGSYSLPGSGDMFMSMTGLNGSYQPTQVPNTGQTQGDSIRHAIGQSLAYSDGLR
GNPLYSPHGLNGNGGWHDAVTPSSVTSPIEGANSVHSDTSN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcagagccatctgatgcagaccctgggcggcgtgaccctcaccggacacccg
gtggctttgacgttgcctcttgacggaaccgacgcgagaaacaagcaggacatcggagac
attctgcatcagatcatgaccatcaccgaccagagtctggacgaggctcaggcaaaaaag
catgggctgaactgtcacagaatgaagccggctctgttcagcgtgctctgtgaaatcaaa
gagaaaacaggtctcagtatccgtggcagtcaggatgaagatcctgcggacccccagctc
atgcgtctggataacatgctgctggcagagggcgtgtccggaccggagaaagggggcggg
gcggcggcggttgctgcggcaacagcagcagtgggagtgggagctgataactccatcgaa
cactcggactacagagccaaactcagccagatcagacagatctaccacaccgagctggag
aaatacgagcaggcatgtaatgaattcacaacccatgtgatgaacctgttgagggaacag
tctcgcacgcggcccatctcacctaaagagattgaacgcatggtgaacatcatccaccgc
aaattcagctccatccagatgcagctcaagcagagcacctgtgaggccgtcatgatcctc
aggtcccgcttcctcgacgccaggaggaaaaggcgcaacttcagcaagcaggcgacagag
attctgaacgagtatttctactctcacctcagtaacccatatcccagcgaggaggccaaa
gaggagctagccaagaagtgtgccatcactgtgtcacaggggaagggaagcaccatcact
gtgtcacaggtttctaactggtttggtaataaacgtattcgctataagaagaacatcggt
aaattccaggaagaggcgaatctgtacgcagcgaagacggcagtgacggcggctcaggcc
gtggcggccgcagtacagaacagccagaccaactcgcccgcaacgcccagctctggcttt
cagatgaaagatgaagactttcagttggatgcagcagaagataaaaataatctgttaaat
aacatgttcactggctcttcaggttcgtatagtttgccgggttcaggagacatgtttatg
agcatgaccggcctgaacggatcctaccagccgacccaggtccctaacacaggacagaca
cagggagactccatacgtcacgccatcggtcaatcgttggcttacagcgatggtctgcgg
ggaaacccactttacagccctcatggcttgaatggtaacggtggctggcatgatgctgtc
actccatcttctgtgacatctcctatagagggagcaaacagcgttcactcggatacctct
aactga
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