KEGG   Garra rufa (doctor fish): 141335392
Entry
141335392         CDS       T11039                                 
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04010  MAPK signaling pathway
grf04137  Mitophagy - animal
grf04141  Protein processing in endoplasmic reticulum
grf04210  Apoptosis
grf04217  Necroptosis
grf04621  NOD-like receptor signaling pathway
grf04622  RIG-I-like receptor signaling pathway
grf04920  Adipocytokine signaling pathway
grf05132  Salmonella infection
grf05168  Herpes simplex virus 1 infection
Brite
Enzymes [BR:grf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     141335392
Messenger RNA biogenesis [BR:grf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     141335392
Ubiquitin system [BR:grf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    141335392
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_6 zf-C3HC4_2 Sina_ZnF zf-C3HC4_4 SlyX Rootletin
Other DBs
NCBI-GeneID: 141335392
NCBI-ProteinID: XP_073696938
LinkDB
Position
5:complement(51739765..51752039)
AA seq 501 aa
MAAQEPSPPSSMENNKPGFPKKILANKLEDKHLCNCCQNILRRPFQAQCGHRFCSYCFNR
TVGSGPQKCNACIKEDIFEEPTSILKQGCAFPDNAARREVENLPAVCFNEGCSWKGSIRD
YELSHEGKCEFMILPCPLCKELIRLNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRYHVVGCDMSVEKEKIHDHERACA
HEHLNLLLHYIMGMKLQLHSEKTKVADLGRRCQELEVKAGTFEDVVCVLNREVERFATTM
EASNRQHRLDQDKIEALSNKVRQLERQVGVKDLTVAEMEGRLREMSATTFDGVFIWRISD
FTKKRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGMSDA
LLKWPFNQKVTLMLLDQSNREHIIDAFRPDITSSSFQRPVSEMNIASGCPLFCPLSKLEG
KNSYIRDDTIFIKAIVDLTGL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggctgctcaagaaccctctcccccgtcctccatggagaacaacaagccagggttccca
aagaagattctggccaacaaacttgaagacaaacatttatgcaactgctgtcagaacatt
ttgagaagaccgttccaagcgcagtgcggccatcgcttttgttcttactgcttcaaccgg
actgttggatctggacctcagaaatgtaatgcctgcatcaaggaggacatcttcgaagag
cccacgtcaatcctcaaacaaggctgcgcgtttcctgacaatgctgccagaagagaagtt
gaaaatcttccagctgtgtgcttcaacgaaggctgttcctggaaaggcagtattagagat
tatgagttgagccatgaggggaagtgtgagttcatgattctgccgtgtcccttgtgcaaa
gagctcattagattgaacgaacaggagcgtcataatgaacgcgagtgtccggagagaacg
ctcaactgcaagtactgtaaagaaccatttcacttcaaaaacatcaaggcccatgatgag
atctgtcccaaatatcctatgatctgtgaaggatgtgcgaagaagaaaatcccaagggaa
aagtatgttgaccacatcaagttctgcagcaaattcaggacgccctgcagatatcatgtg
gttggctgtgacatgtcagtggagaaggagaagatccatgatcatgagcgtgcctgtgct
cacgaacatctcaacctgcttctgcactacatcatgggcatgaagctccagctccacagt
gagaagaccaaggtggctgatctgggccgtcgctgtcaggagctggaggtgaaggcaggg
acgtttgaagatgtggtctgcgtgcttaaccgagaagtggagcgcttcgcaactaccatg
gaggccagcaaccgccagcacagactcgatcaggacaaaatcgaggctcttagtaacaag
gttcgtcagctggagcgccaggtgggtgttaaagacctgactgtggctgaaatggagggc
agattgcgggagatgtctgctaccacgtttgacggtgtcttcatctggcggatatcagac
tttactaagaagagacaagatgccattgctggacgggcgcctgccatgttttcacctgca
ttttacacaagcaagtatggttataagatgtgcctgcggatttacctgaacggggacggg
acgggtcgtggaacgcatctatcgctgttttttgtggtgatgagaggaatgagtgacgcg
ctgctcaaatggccctttaaccaaaaggtgacactgatgctgctggaccagagtaacaga
gagcacatcatcgacgctttccgtcccgacatcacttcctcctcattccagcggcccgta
agcgagatgaacatcgccagtggctgcccgctcttctgtccgctgtccaagctggagggc
aagaactcatacatacgtgacgacaccatcttcatcaaagccatcgtggacctcactggc
ctttag

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