Garra rufa (doctor fish): 141337358
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Entry
141337358 CDS
T11039
Symbol
cbsa
Name
(RefSeq) cystathionine beta-synthase a
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00260
Glycine, serine and threonine metabolism
grf00270
Cysteine and methionine metabolism
grf00670
One carbon pool by folate
grf01100
Metabolic pathways
grf01230
Biosynthesis of amino acids
Module
grf_M00035
Methionine degradation
grf_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
141337358 (cbsa)
00270 Cysteine and methionine metabolism
141337358 (cbsa)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
141337358 (cbsa)
Enzymes [BR:
grf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
141337358 (cbsa)
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Motif
Pfam:
PALP
CBS
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
141337358
NCBI-ProteinID:
XP_073699259
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Position
6:complement(27988010..28012515)
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AA seq
604 aa
AA seq
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MNLVRINDVTQVLLYAQLLKWTVGTYQQENYKGIMPSVPSNKENDSPACPFAGKKTTGKN
SVEKLVADEADKPLQMNKETGATDLKWIRPDLPSRCTWKPGMSLENSPHKHFSRTKAEKI
LPNILDRIGNTPLVRINKISKTFGLKCELLAKCEFFNAGGSVKDRISLRMVEDAERDGIL
KPGDTIIEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTSAR
FDSPESHVGVAWRLKNEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCDGKLDMLVAGAG
TGGTITGVARKLKEKCPNIKIIGVDPEGSILAEPDELNRTDKTQYEVEGIGYDFIPTVLD
RSVVDKWYKSNDEESFAMGRMLMKDEGLLCGGSSGTAMAAAVKFAKELKEGQRCIVILPD
SVRNYMSKFLSDKWMFQKGFLRVEDIMVNKPWWWNLKLQSLNLSAPLTVLPTVTCQKTIK
ILKEKGFDQAPVVNESGLILGMVTLGNMLASVLAGKVKPSDSVSKVLYKQFKQIRLTDNL
GKLSRILETDHFALVVHEQIQYLTDGSSTQKQMVFGVVTAIDLLNFVTAREKRERSMSES
ADEY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgttcgtataaatgacgtgacacaggtacttctgtatgcacagctgttaaag
tggacggtcggcacttatcaacaagagaattacaaaggaatcatgccttcagttccatcc
aacaaagagaacgacagtcctgcctgcccttttgctggcaagaagaccactggcaagaat
agcgttgagaagttggttgcagatgaagctgacaaacccttgcagatgaataaagaaact
ggggccactgacctaaaatggattcgtcctgacctgccaagcagatgtacctggaaacca
ggaatgtctcttgaaaattcccctcacaaacacttttccaggacaaaagctgagaagatt
ctgcccaacatcctggacaggattggaaacacaccactggtccgcataaacaagatctct
aagacttttggactaaagtgtgaacttttggccaagtgtgagttctttaatgctggtggt
agtgtgaaggaccgcatcagtctgcgtatggtggaggatgcagaaagggacggcatcttg
aaaccaggagacaccattatagagcccacctctggaaatacaggtattggtcttgcattg
gctgcagcagtgaagggttatcgctgcattattgttatgcctgagaaaatgagcatggaa
aaggttgatgtgttaagagctttgggtgctgagattgtccgaactcccaccagtgcacgg
tttgactccccagagtcccatgtgggtgtggcttggcgcttgaagaatgagattcctaac
tcacatatcctggaccagtaccgcaatcccagcaaccccctggctcattatgacaccact
gctgaggagattctagagcagtgtgatggcaaattggatatgctggtggcaggagccgga
acaggtggcactattaccggtgttgctcgcaaactgaaggagaaatgcccaaatattaag
attattggggtggacccagagggctcgatcctcgctgagcctgatgagctgaaccggaca
gataaaacccagtatgaagtggagggtatcggctatgactttatacccacagtcctggat
agatctgtggttgacaaatggtacaaatctaacgatgaggaatcatttgccatgggccga
atgcttatgaaagatgaagggctgttatgtggcgggagctcaggcactgccatggcagct
gcagtaaagtttgccaaagagctgaaggagggacagcgctgcattgtgattctgccagac
tctgttcgcaactacatgtccaagtttttgagtgataagtggatgttccagaagggcttt
ctgagggtggaagacatcatggtgaataaaccctggtggtggaatctgaaattacaaagt
ctaaacctttctgctccgctaactgtgctgcccacagtcacatgccaaaaaaccatcaaa
atcttgaaagaaaagggctttgatcaggcacctgtcgtaaatgaatctgggttgattctg
ggaatggtgaccctgggtaatatgcttgcctctgtgcttgcgggaaaggtcaagccctct
gactctgtcagcaaagtactctacaaacagttcaagcagattcgtctaactgacaatctg
ggaaagctgtctcggatcttggaaacagatcattttgctctggtggtccatgagcagatt
cagtatttgacagatggatcttccactcaaaagcaaatggtgtttggagtggtgacagcc
atcgatctcctcaactttgtgacggctcgagagaaaagagagagatctatgtcagaatca
gcagatgaatactga
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