Garra rufa (doctor fish): 141338298
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Entry
141338298 CDS
T11039
Name
(RefSeq) msx2-interacting protein
KO
K25100
Msx2-interacting protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
141338298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141338298
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
141338298
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_5
RRM_YTH1
RRM_7
Lys-rich_AGP
Motif
Other DBs
NCBI-GeneID:
141338298
NCBI-ProteinID:
XP_073699936
LinkDB
All DBs
Position
7:complement(7239762..7260697)
Genome browser
AA seq
3158 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDGTPSSSHGREVAGFSRSAVGPVYGPPV
SLHTREGRYERRLDGSGSDSRERAYDHSPYGHHERGGTFDRPRHYNAEYYRDRTMFASGV
SSSPATSAISGGFDAPESHFESRIRDPFTISSSARRDPYRDDRGRRTDRTYHHRRSRSSH
SSQSRHPSPQRSAGQTTKAAHSPKRAAVSPGRGPRSRSRSPSSSSDSVSSTSSTGSGSSD
SNSSSSEGSRARSVQSTATHAPPAPPTLTLDSDEPRRSFGIRVQNLPTRSTDTSLKDGLF
HEFKKYGKVTSVQIHGASEERYGLVFFRQQEDQEKALSVSKGKLFFGMMIEVTAWNGPET
ESENEFRPLDGRIDEFHPKATRTLFIGNLEKTTNYQQLLDVFQRFGEIVDIDIKRVNGVP
QYAFVQYSDIASVCKAIKKMDGEYLGTNRLKLGFGKSMPTACVWLDGLTSNITEQYLTRH
FCRYGPVVKVVFDRLKGMALILYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQMAFY
RSMQASGQDIRDFYDIPTERREERRTPYHDFTAERAYYENVRTPGIYAEDPRREYPGRSR
DRYAELDHYQGDHYDPRYHEDPREYRDYRDPFEDIRKYSYIQRERERERERFEAERGRWS
PSHQRRTLTPSASPSPSDRVSRDTERRVYRHSSERSGSCSSLSPPPAQFEKSEKSPVEYK
PEGLEREMEPAEAERASGAENKKRGRRKEKADREKGDKAKQRRGKVQSPTVPHSETDRDA
SLDLGSGKVKVPDVENQERPKHKLDKEPSPTDHVTRLESQKGERLECKSEPLDRDGKGKT
KKHLKSDSGSDGKDSLVDSDKLAARKRRFGDPSGKAIRQKRGRLEDDPGSGISQPADFAP
SAGFAKETDIDVKAEKEAQKREHSKSRIGSHYSQREELDGAMRGTSQGPSVRPVEMPEVD
VLDSLKSHPGPSISRRCSTDGTSDKDKVRDEYLENIDLSQSYRKQMEQNRRLRQQLLPPD
KPGKPETPQGVDAEDLEHRSLVHEVGKPPQDVTDNSPPSKTKKQETFELEMSAKRERIYR
TVRQKCEDPEWNNTNSPRFQHAPQQREEEYADPNAQMTVREVIEPLKPEENAPSDQELGG
KQIHASQMSKMSTSLQDEQQRCWESRLKQDLLPDFSRSAEKRRLNRKFYGLWPDLEPGEV
RSDSEEDRENKPNSPAPSTSMSFSERHRPDRLSESKLTTSLERNTFCSFDDDQTITPDTK
ALLERAKSLSSSREDNWSFLDYDSHFPSFRSRKDTEKVESTPRPTPSWYLKKKKIRSESD
DKIDDRKEDPKPKEQERRELFASRFLHSSIFEQDSRRLQHLERKHEDPEHGVGYLYSQQG
PAEGQPDPEPVVLFHSRFLELTRLQQQKNKEQSHQDRKQEESIDATRGSKTPEEEQAPQQ
QNATEPSIQQAEIKSVSPVQVPQTSPVQVLQTSPVQVPQASPVQVPQTSPVQAPQISPPV
LAAKESLPIAETESVDIPTCNLLDSSMKEKDEEHRQPAPLPEQSLLEQPSEPNSSECKES
KIPGEEMALKADDSESTLDTSKVAEQLPSNETPTKNAQPEAEPPVKFPESPSPLPQIPAE
QHVKEPEPPIAPEAESNNADDQKCADNGPVEETVSPPPKSRNKRAKTSPTTPVATTLPAT
PDKQSTRKSERIDKEKYKRSNSPRGEPSKTTPDSKSSSKSPVHSIELEQGTEQNSQLGRA
RRRNVRSVYATPIEDETAQQPGKDAESPRGARKRGVDRDVGSDVEAVAAPLTTRRGRPPK
NRRQAEDVPAGKVERSKSTESKELDGSEMSTEGVPKVGKGKLSPPTQKGVSPGSVSASGI
GKKGDKMEKISESPKLITEENPPVLKNLRIRLDVTEVKAILQTSEEEPGTDESPKNSSPG
VSSKDEVLEAKFENDAVDDANSEKETLPAATKAIEPHVASLARELELEQAVENIAKLTED
ASPIQFKSNVTKAQRSIAEEPERDSEEEKPANPSSETELAAAIDSITSEETCSLPQEQIV
SSVVESVPDVQTLGPSSKVSETCVSTAVVQEETVTTPRKGCKGRGAKASKKGKGQKGAGS
KKEPIKDVVLDAENIPVKSPESVSAELTATMERSPTSTAVVITSSSKQGVNSTAPNAEVP
NKPESPLKTEVDIPKSSPAISQSPTSSKYQPYSYKNTSPSLSPTRPCLKNLSSYPSRRSV
SPTERFNQPKEAGVLSPLLTSVPPIESPTLPSDTLAHDGDLRKILTKPRTVLEIGAASGN
MHAHPLRESDFTPDVVTSKSALQDNRQPSVSAQPVVRQPASIPSPETKQIFSEKSVISVI
ASTPTSVISRVCNPPDSEDKPNAQIGNPFLEKQPPKQIYQPSLEESSTYHGPAVGEEGGN
AGRYIVESTSLSTGSSTGLRVQTSEGVVVLSHSGQKMEGPLRISAKISQIPPASAVDIES
QQLVSMPQIKQELYGASQPPSSKCPLPSDHGHSIKSQPNISTIKQESALDKLESAYAPVQ
SGVVKILQQTPGPSQVMGYHPTEYPMVMKHPKKGDGPESLNAEKPAWVPTISPAISPHLP
SAAGNHVGFIAGTPADRTSSLIQPKQEPRSPRKSGHPHSPFHSKVSSPIGSSSPKGVSMV
LPPGLPPLSQYVHHSEQSVIMPPHNAHASIGRMSPHRVGAMGHLTQGEVRVNTPPLSMMN
YGIHSESLTSSWAPGQQRPTSPQAVGNREMVLKVNPANARPPAAQLKPDSIPAEYRGALH
SGLPLERFNMSQRDMRVLMHHQQSDRPTVELHPENIPPSSTPTSIAASLSPRPHLLAKGV
SEKDTSKASELKRAQTPPNKEGMMAIRSPMPPMASPQRVQLISAGTGASFSEYSTLYTNL
RPAHAQFGESSPMGITQSAHSIPPSKTVQEPESSQAQAESKVELVGHQPVNMVQLLTKYP
IVWQGLLALKNDTAAVQLHFLCGNKALGLRSLPLPETGGILRIVQRMRLEAQQLEGVARR
MTGESDFCLLLAMPCGLDQEDVLNQTQALKSAFINYLQAKLAAGIINVPNPGSNQPAYVL
QIFPPCEFSESHLSRLAPDLLSQISSISPHLMIVITSV
NT seq
9477 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctctgggtgggaaatttacccgaacatgttcgcgaggag
aagattgtggagcattttaaacggtatggccgggtggagagcgtcaaggtcctgcgcaag
cgcggctccgagggcggcgtggcggccttcgtggatttcgtggacatcaagagcgcccag
aaggcgcacaacgccgtcaacaaaatgggggacagggaccttcgcaccgattacaatgag
ccgggttcagtgcccagcgccgtgcggggtctggaggacgggaccccctctagcagtcac
ggaagggaggttgcggggttctcgaggagcgccgtggggccggtgtacgggcctccggtg
tctctccacaccagagaggggcgctatgaacgcagactagacggcagcggctcggacagc
cgggagcgagcgtacgatcacagtccgtacggacaccacgagcgcggcggcaccttcgac
aggccgcgccactacaacgccgagtattaccgggaccgcaccatgttcgcctccggggta
agctccagcccggccaccagcgctatcagcggcggcttcgacgcaccggagtcgcacttt
gagtctcggatccgcgaccccttcaccatctccagctccgctcgccgcgacccgtaccgc
gacgacagggggcgccgcaccgaccggacctaccaccatcggcggagccggtcctcgcac
tcttcgcagtcacgccacccgtcgccacagaggagcgcgggacagactaccaaagccgcc
cactctcccaaaagagcggccgtgtcgcccggacgaggcccgcggtcacgctcgcgcagc
ccgtcgtcaagctctgattcggttagcagcaccagcagcaccggcagcggcagcagtgat
tcgaacagcagctccagtgaaggatcgcgagcacgttcagtgcagtcgacggccacgcac
gctcctccggctcctcctacgcttacgctggactcggacgagccacgaaggagcttcggg
atcagagtgcagaacctgcccacgcgttccacagatacgagtttgaaagacgggctcttt
cacgagtttaagaagtatggtaaagtgacgtcggtgcagatccacggtgcatcagaggag
cgctatggcctggtgttcttcagacagcaggaggatcaggagaaggccctcagcgtgtcc
aagggaaagctcttcttcgggatgatgatcgaggtcacagcctggaacggccccgagacg
gagagcgagaacgagtttcgtcccctagacggacgcatcgacgagtttcacccgaaggcc
actcgtacgctgttcatcggaaacctggagaagaccaccaactatcagcagctactcgac
gtcttccagcgcttcggagagatagtggatattgatatcaagagggtgaacggcgttccc
cagtacgcatttgttcagtactctgatattgcgagtgtttgtaaagccattaagaaaatg
gacggagagtatctgggcacaaacagactgaagctcggctttgggaagagtatgccgacg
gcatgcgtgtggttagacggcctgacctctaatatcacagagcagtacctcacacgacac
ttctgtcgatacggtccggtggtcaaggttgtgtttgataggttaaaaggaatggctctc
attctgtacaacaacactgattttgcccaagcggctgttagagaaaccaaaggatggaag
ataggaggaaacaaaattaaggttgattttgccagtcaggagagtcaaatggctttctat
cgatctatgcaggcgtctggacaggatatccgtgatttttatgatattccgacagaaagg
agggaggaacggagaactccttatcatgactttacagcagaacgggcgtattacgagaat
gtacggactcctggaatttacgctgaagacccccgtcgcgaataccctggtcgcagtcgc
gaccgctatgcagagttagatcattatcaaggagatcactatgatcctcgttatcatgaa
gacccgcgggaatacagagactaccgagacccttttgaggacatcaggaagtacagctat
atccagcgggagcgtgaacgggagcgcgaacgctttgaggcggagcgaggccgttggagc
ccgtctcatcagcggcgcaccctaactccctctgcttccccctcgccgtcggatcgcgtg
tcaagagacaccgaacgacgcgtgtacaggcattcctctgaaagatctggaagctgcagt
tcgctgtctccacctccggctcagttcgagaagtctgaaaaatcgccagtagagtacaaa
ccggaaggactagagagagaaatggagccggccgaggcggagcgcgcaagtggagcggag
aacaagaagcgtggcagacgcaaggagaaggctgacagagagaagggagacaaggcaaag
caaaggagagggaaagtgcagtctccaactgtacctcattctgaaacggatagagatgcc
agtctggatttgggatctgggaaggtgaaggttccagatgtggagaatcaagaaagaccg
aagcataaactggacaaggagccttcccccactgaccatgtaactcgcctggagtctcaa
aagggagagcgacttgaatgtaaaagcgagccgttagacagggacggcaaaggaaagaca
aagaagcatttaaaatcggactctggtagcgatggcaaagactcccttgtagattctgac
aaacttgcagcgaggaagaggcggtttggcgatcccagcgggaaagcgatacgacagaaa
cgggggcgtctggaggatgatccgggttctgggattagccaacctgctgactttgcccca
agcgcaggatttgcaaaagagacagatattgatgtaaaagcagagaaggaggctcaaaaa
agagagcactccaaatcccggattggttctcattatagtcaaagggaagagctggatggc
gctatgagaggaacgtctcagggcccgtcggtgagaccagttgaaatgcctgaggtggat
gttttggactctttgaagtctcaccctgggccaagcatttctagacgatgttcaacagat
ggaacctcagataaggacaaggtgagagatgaatatctagaaaacatcgacctttctcag
agttaccgcaaacagatggagcaaaatcggcggctgcggcagcagctgctgccgccagat
aaaccgggcaagccagaaacccctcaaggtgtagatgcggaagatcttgagcatcgtagc
ttggtgcatgaggtcggcaaacccccgcaggatgtgacggataattcacctccgagtaag
accaagaaacaagagacctttgagttagaaatgagtgctaagagagaaaggatttaccga
acggtccggcaaaagtgtgaagatcccgagtggaataacacaaactctccaaggtttcag
catgccccccaacaacgagaggaagaatatgcagaccctaatgcgcaaatgactgtgaga
gaggtaatagaacctttgaaacctgaggaaaacgctccgtcagatcaggagcttggcggt
aaacagatacacgcctcgcagatgtcaaagatgagtacatctctacaagacgagcagcag
aggtgctgggagagtcgactaaagcaagacttgttaccagacttttcaaggagcgctgag
aaaagacgtctcaatcggaagttctatggactttggcctgatttggaacctggtgaagtg
cgttctgattctgaggaggatcgtgaaaataagcccaactctcctgcaccgtcgacttca
atgtccttctctgaaagacatcgtccagacagattatcagagtctaagctgacaacgtct
ctggagagaaacacattctgttcttttgatgatgatcagacaatcacaccagatactaaa
gctttgctggagcgtgcaaagtctttgtcctcgtcaagggaagacaactggtctttcctc
gattatgattcacatttccccagtttcagaagtagaaaggacacggagaaagtagagtca
accccacgaccaactccctcatggtacctgaagaagaaaaaaattcgaagcgagtctgat
gacaaaattgatgacaggaaggaagatccaaagccaaaagaacaggagagacgagagttg
tttgcatcacgttttttgcacagttctatttttgagcaggattcaaggcgtctgcagcat
ctggaacgaaaacatgaggaccctgaacatggtgttggatatctgtactctcagcaaggt
ccagcagaagggcagcctgacccagaaccagttgtgcttttccatagccgcttcttagaa
ctaacaaggttgcagcaacagaagaataaagaacaaagccatcaagatcgcaaacaagaa
gaaagcatagatgcaaccagaggaagcaaaacaccggaagaagaacaagcaccacagcag
caaaatgctactgaacctagtatccaacaagctgagatcaaatctgttagtcctgttcag
gtccctcagactagtcctgttcaggtccttcagactagtcctgttcaggtccctcaagct
agtcctgttcaggtccctcagactagtcctgttcaagctcctcaaatatcaccccctgtt
ttagcagccaaagaatccttgccaatagcggaaacagaaagtgttgatattcctacctgt
aatttgcttgattcttctatgaaggagaaagatgaagagcatagacagcccgcacctctg
ccagaacagtctttgcttgagcaaccctcagaacccaattcttcagaatgtaaggagtcg
aagatcccaggagaggagatggcactgaaggctgatgattctgaaagtactctggacacc
agtaaagtagcagaacagctcccaagcaacgaaacaccaaccaaaaatgcacagccagag
gctgagcctccagtaaagtttcctgaatcaccaagtcccctcccacaaatccctgctgag
cagcatgtaaaagaacctgagccacctattgcacccgaggctgaatccaataatgcagat
gatcagaaatgtgctgataatggtccagttgaagaaactgtgtcaccccctccaaagtca
agaaataaaagagctaaaacctcgcctaccacaccagtagccacaactctgcctgctacc
ccagacaaacaaagcacccgcaaaagtgagcgcattgacaaagaaaagtacaaacgttca
aattctccaaggggagagccatccaagacaacacctgattcaaagtcatcaagtaagtca
cctgtccacagcatagaactggaacaaggaacagagcaaaattcacagttaggtagggca
agacgtagaaatgtgcgttctgtctacgctacaccaattgaagatgaaactgctcagcaa
cccggaaaagatgccgaatcgcctcgtggtgcacggaagcgaggagtagacagagatgta
ggctctgatgtagaggctgttgctgcaccattaaccacgagacggggacgcccccctaag
aatcgacgccaagctgaggatgtaccagcgggcaaagttgaacggtcaaaatctacagag
tctaaggagttggatggcagtgagatgagcactgagggggttcccaaagtgggtaaaggc
aaattatcaccccccacacaaaaaggagtcagtccaggaagtgtatctgcatctggaatt
ggaaagaaaggggacaaaatggagaaaatatcggaaagtcccaaactcattactgaagaa
aaccctcccgttctgaaaaaccttagaatccgtcttgatgtgacagaagtaaaggcaata
cttcagactagtgaagaagaacctggaaccgatgagtctcccaaaaatagctcacctggc
gtgtcttcaaaggatgaggtactagaagctaaatttgaaaatgatgccgtggatgatgct
aatagtgaaaaggagactttgcctgctgcaacaaaagccattgagccacatgtagcttca
ctggctcgagagttggagcttgagcaagctgttgagaatattgccaagctcacagaagat
gcctctcctattcagtttaaaagtaatgtgacaaaggcacaacgttcgatagctgaagag
ccagagcgtgactctgaagaagaaaagcctgcaaatccgtctagtgaaacagagcttgct
gctgctatagattccattacatcagaggaaacttgtagcttgccacaggaacaaatcgtg
agctctgttgtagaatctgttcctgatgtgcagactcttgggcccagttcaaaagtatct
gaaacctgcgttagcacagcagttgttcaggaggagaccgtaaccactcctagaaaaggg
tgtaaaggcagaggagcaaaagcgtcaaagaagggcaaaggccaaaagggtgctggaagc
aaaaaggaacccatcaaagatgtagttttagatgctgaaaatatccctgtgaagtccccg
gagtcagtatctgcagagcttacagccaccatggaaagatcaccaacaagtacggctgtt
gtcattacttcctcttccaagcagggtgtcaattcaaccgctcccaatgcagaagttcca
aacaaacctgagtcgcctcttaaaactgaggtggatatccccaagtcctctccggctatt
agccaaagcccaacgtcatccaagtaccagccttattcatacaaaaacacatctccctca
ctatctccaacgagaccttgcctcaagaacttgtcctcgtacccgagcaggcgttctgtt
tccccaacggagcgttttaatcagccaaaagaagctggggtgctctcccctctgctgacc
tctgtacccccaattgagagccccacgttaccctcagacaccctggcacatgatggtgat
ttgcgtaaaatcctcacaaaacctagaactgttttggaaattggtgctgcgtccgggaat
atgcacgctcatcctttaagggaaagcgactttacaccagatgtggttactagcaaaagt
gctcttcaagataaccgacaaccctcagtttcagcccaacctgtagttcgacagcctgct
tctataccctccccagaaacaaagcagattttcagtgagaagtcggtgatttcagtcatt
gcgtccactcctacctccgtcatcagtcgtgtctgcaatccccctgactcagaggacaag
ccaaatgcccagattggaaatccttttcttgaaaaacaacctccgaaacagatctaccag
ccaagcttggaagaaagcagtacttaccatggtccagcagttggtgaggaaggtggaaat
gctggacgctacattgtggagagtacgtctttgagtacgggttccagcacagggttgaga
gttcagacttcagaaggtgtggtggtgctaagtcattctggccagaaaatggaggggcca
ctgcgcataagtgccaaaatcagccagatcccacctgccagtgctgtagacatagagtca
caacagctggtgtcaatgccccagatcaagcaggaactttacggtgcctcccagccgcca
tcttcaaaatgcccacttccctcagatcatggacattcaataaaatcgcaaccaaacatc
tcaacgattaagcaagaatctgcactcgacaaattagaatccgcttatgctccggttcaa
agtggagttgttaaaatattgcaacaaacccctggcccgtcgcaggtcatgggttaccat
cctacagaatacccaatggtgatgaagcaccctaagaagggtgatgggccagagtctctc
aacgcagagaaacctgcttgggtcccaactatcagtcccgctataagtccacatcttccc
tcagcagcaggcaatcacgttggcttcatagccggcacgccggcagaccgaacttcatca
ctcattcaacccaagcaggaaccacgatctccacggaaatccggacatccgcattctcct
ttccattccaaagtgtcatctcctatcggctcttcgtctcccaaaggtgtgtctatggtc
cttccccctggattgccccctctgtcccagtatgtccaccactcagagcagtctgtgatc
atgcctccacacaacgctcacgctagcatcggaaggatgtcgccacaccgcgtcggtgca
atgggacaccttacccagggtgaggtgagagtgaacactcctcctctctctatgatgaac
tatgggattcactctgagagcctcacttcctcttgggcacctggccagcagaggcccaca
tctccccaagctgtggggaacagggaaatggtcctcaaggtgaacccggccaatgcaaga
ccgcctgccgctcaactgaaaccggactccataccggcagagtatcgcggagctctccac
agtggtttacctctggagcgattcaacatgtcacaaagagacatgagagtactcatgcac
caccaacagagcgatcgccccactgtggaattgcaccctgagaacataccgccgtcttcg
actcccactagcatcgcggcgtctctctctcctcggccacacttgttagcaaagggagta
tctgagaaggacacatcgaaagcatcagagctgaagagggctcagacacctcctaataag
gagggaatgatggcgatccgtagtccgatgcctcccatggcttcccctcaaagagttcag
ctgatctcagcaggaactggggcttccttctctgaatattcaaccctgtatacgaacctg
cggcctgcccatgctcagtttggcgagagttctccaatggggattacccagtctgcccat
agcatcccaccgtcgaagaccgttcaagagccagagtcaagtcaagcacaggctgaatct
aaggtggagttggttggacaccagccggtgaacatggtgcagcttctgacgaaataccct
attgtgtggcaaggcctgctggcgctgaagaatgatactgcagcagttcagctgcacttc
ttatgtggaaacaaagctctcggcctacgctctttgcctctgccggagactggagggatt
ctccgcatcgtccagaggatgaggctggaggcacagcagctggagggagttgcccgcaga
atgacgggtgagagtgatttctgcctgctgttggccatgccgtgcggtctggaccaggag
gacgtgttgaaccagacgcaggcgctcaaatccgccttcatcaactacctgcaggccaaa
ctggcggccggcatcatcaacgtccccaaccccggctccaatcagccggcctacgtgttg
cagatcttccctccgtgcgagttctccgagagccacctgtctcgcctggctcccgatctc
ctgagccagatctccagcatctctccgcacctgatgatcgtcatcacctccgtctga
DBGET
integrated database retrieval system
