KEGG   Garra rufa (doctor fish): 141339009
Entry
141339009         CDS       T11039                                 
Symbol
pdgfaa
Name
(RefSeq) platelet-derived growth factor alpha polypeptide a isoform X1
  KO
K04359  platelet-derived growth factor subunit A
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04010  MAPK signaling pathway
grf04020  Calcium signaling pathway
grf04510  Focal adhesion
grf04540  Gap junction
grf04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    141339009 (pdgfaa)
   04020 Calcium signaling pathway
    141339009 (pdgfaa)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    141339009 (pdgfaa)
   04540 Gap junction
    141339009 (pdgfaa)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    141339009 (pdgfaa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:grf04052]
    141339009 (pdgfaa)
   00536 Glycosaminoglycan binding proteins [BR:grf00536]
    141339009 (pdgfaa)
Cytokines and neuropeptides [BR:grf04052]
 Cytokines
  Growth factors (RTK binding)
   141339009 (pdgfaa)
Glycosaminoglycan binding proteins [BR:grf00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   141339009 (pdgfaa)
SSDB
Motif
Pfam: PDGF_N PDGF DUF3562 KH_PARP14_8
Other DBs
NCBI-GeneID: 141339009
NCBI-ProteinID: XP_073700725
LinkDB
Position
7:complement(34143241..34155232)
AA seq 194 aa
MRAALIHFLVCCFFLLSAAAEEAPIPQELIERLSNSEIHSISDLQRILEIDYLENEVLQD
VKQGHYKEHLYDSRHLKNSHSRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTAANFLIWP
PCVEVRRCSGCCNTSNMRCHPSKKHHRTVKVAKVEYVRRRPKLREVQVQLEDHLECVCTS
KHHSESRIHTADIR
NT seq 585 nt   +upstreamnt  +downstreamnt
atgagagccgcgctgattcactttctcgtctgctgcttctttctgctttcagcagctgct
gaggaagcaccaattccgcaagagctgatcgagagactttctaacagtgagatccacagc
atcagtgacctccagaggatcctggagattgactatctagagaatgaggtgctgcaggac
gttaaacaaggccactataaggagcatctgtatgacagcaggcatctcaagaactctcac
tccagacgcaagagaagcattgaggaggcagtgcctgccgtctgtaagactcgcactgtg
atctacgagatcccacgcagtcaggtcgatcccacggccgctaacttcctgatctggcct
ccgtgtgtggaggtgagacgatgctcgggatgctgcaacaccagcaacatgcgctgccat
ccgtccaaaaagcaccacaggactgtgaaggtggccaaggtggagtacgtacgcaggagg
ccgaagctccgggaggtgcaggtgcagctggaggatcatctcgagtgcgtctgcacgtcc
aaacatcactcagagtcccgcatacacacggcagatataaggtga

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