Garra rufa (doctor fish): 141340320
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Entry
141340320 CDS
T11039
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
grf Garra rufa (doctor fish)
Pathway
grf04081
Hormone signaling
grf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
141340320 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
141340320 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141340320 (rapgef4a)
Membrane trafficking [BR:
grf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
141340320 (rapgef4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
141340320
NCBI-ProteinID:
XP_073701350
LinkDB
All DBs
Position
8:complement(16452167..16552689)
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AA seq
1003 aa
AA seq
DB search
MVAAHTSSHPSASAEWIICLDKRPEERSGEDVDIILARLKSVKAFEKFHPGLLQQICLCG
FYECLEKGITLYRQGDIGTNWYTVLSGSLDVKVSETANHQDAVTICTLGIGTAFGESILD
NTPRHATIVTREFSELLRIEQKDFRTLWENYRQCMAGLLVPPYGVMESGPHADRMPDKDN
LSNSSPGSSSKHLNKVPSEKILRAGKVLRNTILSRAPHMIRDRKYHLKTYRQCCMGTELV
DWLMQHTSCVHSRVQAVGMWQVLLEEGVLNHVDQELSFQDKYLFYRFLDDETEDTPLPTE
EEKKESDEELQDTLLLLSQIGPDAHLRMILSKQPGQRTVDDLEIIYEELLHIKALSHLST
TVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFG
KLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHEEDVLVLEKTNN
RGSSSSPLKYTVMSGTPEKILEHLLETMKLDSQFTESDPALDDFLLMHCVFVPNSQLCPL
LMAHYHAQPSQGSEQERMDYTLNNKRRVIRLVLQWAAINTDHLQEEDSSFNFLQEFYETV
CEDARHIPALKDQLPELEKVIKQNCDDGRPSQKKHKVLLRQFSTGNDRLQKRQPIKSTDE
ILFKVYCSDHTYSTIRVPVAASVREVIAAVTDKLGSGDDLLLVHLNSAGDKELLKPSDVS
IFSSLSINGRLFVCPRDQIDSLIPLPEQEGPSAGSMSTFELMSSKDLAHQMTLYDWELFD
CVHEHELIYHTFGRQHFKKTTANLDLFLRRFNEVQLWVVTEVCLCPTLSKRVQLLKKFIK
IAAHCKEFKNLNSFFAIIMGLGNPAVCRLSQTWEKLPSKFKKFYGEFENLMDPSRNHRAY
RLTVAKLEPPIIPFMPLLIKDMTFTHEGNKTFTDRLVNFEKMRMIANTVRIMRYCRSQPF
NQEAPQVTGKSHQDVRSYVRHISVIDNQRTLSQLSHRLEPRRT
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcggcacacacctccagccacccgtccgcctctgctgaatggatcatctgtctg
gataagagaccggaggaacgttcgggagaggatgtggacattatcttggcccgtctgaaa
agtgtaaaggcctttgagaagttccaccctggtctacttcagcagatctgtctgtgtggc
ttctatgaatgtctggagaaaggcatcacattgtacaggcagggtgacattgggactaac
tggtacaccgtcctgtccggttctctggatgtcaaagtctccgaaacagcaaaccatcag
gatgctgtcaccatctgcactttgggcatcggcacagcttttggggagtctattctggac
aacacgccgcggcacgccaccattgtcaccagagagttcagtgaactactacgcattgag
cagaaggactttaggaccctttgggagaattatcgtcagtgtatggctggtctgctggtc
cctccctatggtgttatggagagcggcccacatgctgacagaatgcctgacaaagacaat
ctgagcaacagttcacccggatcatcatccaaacacttaaataaggtgccctcagaaaag
atcctacgggcaggtaaagtgttgcgaaacaccatcctgtcccgagcacctcacatgatc
agagacaggaaataccaccttaaaacatacaggcagtgctgtatgggcacggagcttgtt
gattggctgatgcagcacacttcctgtgttcactctcgtgttcaggctgtagggatgtgg
caagtactgctggaggagggcgtcctaaatcatgtggaccaggagctgagtttccaagat
aagtatctgttttatcgcttcctggacgatgagacagaggacacacccctgcccactgag
gaagagaagaaagagagtgatgaagaactacaggacaccctcctgctcctctctcagatc
ggacctgacgcccatctgcggatgatcctgagtaaacaacctggccagaggacagtagat
gacctggagatcatttatgaggagctgctgcatattaaagccttatcacatctgtccacc
actgtgaagagggaactagctggtgttctgatatttgagtcccacgccaaagcagggaca
gtgttgtttaatcaaggggaggagggcacgtcatggtacatcatcctgaagggctctgtt
aacgtggtgatctatggaaagggcgtagtatgcacgttacatgagggagatgacttcggg
aagctggctctggtgaatgacgcacctcgggcagcgtctatcgtactgagagaggacaac
tgccacttcctgagagtggataaagaagacttcaacagaatcctcagggatgtggaggca
aacacggtccgtctgaaggaacatgaggaggatgtgttggttttggagaaaactaacaac
aggggctccagttcctctcctctcaagtatacagtgatgtcaggaactccagagaagatt
ctggaacatcttctggagacaatgaaacttgactcccagttcacagagtcagatcctgct
ttggatgactttttgcttatgcactgtgtttttgtcccgaacagtcagctgtgtccactg
ctcatggcccactatcatgctcagccgtctcagggcagtgaacaggagcggatggattac
actctcaataacaagcgcagggtgattcgtctggtgttacagtgggccgccatcaacaca
gaccacctgcaggaggaggacagctctttcaactttctccaggagttttatgaaacagtg
tgtgaagatgccagacacatcccagctttgaaagatcagttgcccgaactagagaaggtc
atcaaacagaactgtgatgatggccggccctctcagaaaaagcacaaagtcctgctgcgg
cagttcagcacagggaacgacagactgcagaagagacagccaatcaaaagcacagatgag
atcctctttaaggtgtactgcagtgatcatacctactccacaatccgagtgcctgtcgct
gcttctgtcagagaggtcatcgccgctgttaccgataagctgggctcaggagatgatctt
ctgctcgtccacctcaactcagccggagataaagagcttctaaagccatcagatgtgtcc
atcttctcatcactgagtattaatggccgtctgtttgtctgcccgagggaccagattgac
tctttgattccgctgccggagcaggaagggccgtctgcaggctccatgtccacgtttgag
ctcatgagctctaaagatctggctcatcagatgacgctctatgactgggagctcttcgac
tgtgtacatgagcatgagctgatttaccacacgtttggccgtcagcatttcaagaagacc
acagctaatctggatctgttcctgcggcggtttaatgaggttcagctgtgggtggtcaca
gaagtttgtttgtgtcccacgctcagtaaacgagtccaacttctcaagaagtttatcaag
atcgcggcacactgtaaagagtttaagaacttgaactcattctttgccattatcatgggc
ctgggaaaccctgcggtttgtcggctcagtcagacatgggagaaactgcccagcaagttt
aagaagttttatggagagtttgaaaacctgatggatccctccagaaatcacagagcgtat
cgacttacagtggccaagttagagccacctatcattcctttcatgcctttattaattaaa
gacatgactttcacacatgagggtaacaagacgtttactgacagattggtgaactttgag
aaaatgagaatgattgcaaacacagtcagaatcatgagatactgccggagtcagcccttc
aatcaagaagcaccacaggtgactggtaaaagccatcaggatgtgcggagctatgtgcgt
cacattagcgtgattgacaaccagcgtaccctatcacagctgtcccacaggctggagccg
cgccggacctga
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