Garra rufa (doctor fish): 141340446
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Entry
141340446 CDS
T11039
Symbol
nr1i2
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2
KO
K08540
pregnane X receptor
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141340446 (nr1i2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
grf03310
]
141340446 (nr1i2)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
141340446 (nr1i2)
Nuclear receptors [BR:
grf03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
141340446 (nr1i2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
141340446
NCBI-ProteinID:
XP_073701510
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Position
8:10250627..10323837
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AA seq
429 aa
AA seq
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MCLLQLRMSEDMEELSPLGDSGHGDGSEEETEEDDELKICQVCGDKSTGYHFNAMTCEGC
KGFFRRAMKRPAQLCCPFQNACVITKTNRRQCQSCRLQKCLSIGMKRELIMSDEAVEKRR
MQIRRKRMQEEPVTLSPQQETVIQELLTAHQKTFDMTCSNFIQFRPLDRDQKFLSEYGRE
PDIGRLTHTTMHKPPPEDAMQRTNSYFSPSSPSSNLQSPENKERKRHKNAIFTTLPHFAD
LTTHMIKNIINFSKTLTMFRALIIEDQIALLKGASFEIILIHFNMFFNEVTGIWECGPLQ
YCLDDAMRAGFQRHLLDPMMNFHYALRKLHLHEEEYVLMQAISLFSPDRPGVTHHSVIDR
NQEIVALTLKTYIEAKRTEPEKHLLYPKIMACLTEMRSMNEEYTKQLLKIQDIQPDVSPL
LLEIISKDG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttacttcagctcaggatgagtgaagatatggaggagctttctcccctgggcgac
tcgggacacggtgatgggtctgaggaagaaacagaggaagatgatgagctcaaaatctgt
caagtatgcggtgacaaatccacaggataccactttaacgccatgacatgtgaaggctgc
aaagggttcttcagacgcgccatgaagcgacccgcacagctctgctgcccatttcagaac
gcctgtgtcatcactaagaccaacaggagacagtgccaatcctgccgactccagaaatgc
ctctcaatcggcatgaagagggaactgatcatgtcagatgaggccgttgagaagcgaagg
atgcagatcagaaggaagaggatgcaggaggagcctgtaacgctctctcctcaacaggaa
actgtcatacaggagctgctcaccgcacatcaaaagaccttcgacatgacttgctctaac
ttcattcagttccggcctttagatcgagatcagaagttcttgtccgagtacggtcgagaa
ccagacattggcaggctcacgcacacaaccatgcacaaaccaccgcctgaagatgcaatg
caaagaaccaacagctacttctcaccctcgtccccgtcctccaaccttcagagtcctgaa
aataaagagaggaagcgacataaaaatgccattttcaccactctgccacatttcgcagac
ctcaccacgcacatgatcaagaatataatcaactttagcaagacgctaacaatgttcagg
gctctaatcatagaggaccagatcgcgctgctgaaaggtgccagctttgagatcattctg
atccactttaacatgttctttaatgaggtgacaggcatctgggagtgtggcccgctacag
tactgcctggatgacgccatgcgagctggtttccagcgccatctgctggaccccatgatg
aatttccattatgctctgcgcaagctgcacttacatgaagaggagtatgtgctgatgcag
gccatctcactcttctccccagatcggcccggcgtgacacatcacagtgtgatcgaccgc
aaccaggaaatagtagctctcaccctgaagacctacatcgaggccaagaggacagagccg
gagaaacacctgctgtacccaaagatcatggcgtgcctgaccgaaatgaggagtatgaat
gaagaatatacaaaacaactgctgaaaatccaggacattcagcctgatgtgtctccgctt
ttattggaaataataagcaaagacggctaa
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