Garra rufa (doctor fish): 141340581
Help
Entry
141340581 CDS
T11039
Name
(RefSeq) cystathionine beta-synthase-like protein
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00260
Glycine, serine and threonine metabolism
grf00270
Cysteine and methionine metabolism
grf00670
One carbon pool by folate
grf01100
Metabolic pathways
grf01230
Biosynthesis of amino acids
Module
grf_M00035
Methionine degradation
grf_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
141340581
00270 Cysteine and methionine metabolism
141340581
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
141340581
Enzymes [BR:
grf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
141340581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
141340581
NCBI-ProteinID:
XP_073701717
LinkDB
All DBs
Position
8:complement(9956281..9979621)
Genome browser
AA seq
595 aa
AA seq
DB search
MPSVPSSSESVGTGPICPHADKFLTKAANGEAKLKSDDVLNGKAGQKLIVNSTDHVNETN
GNHIENGSEANMERKWIRPDLPSRCTWKLDDPNTESPHNHFQRTKTPNILPNILSKIGET
PLVRMNKIPKTFDLKCELLAKCEFFNAGGSVKDRISLRMVEDAEKDGILKPGDTIIEPTS
GNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTSARFDSPESHVGVA
WRLKNEIPNAHILDQYRNPSNPLAHYDTTAEEILEQCDGKIDMLVAGAGTGGTITGIARK
LKEKCPNIKIVGVDPEGSILAEPEELNKTDKTQYEVEGIGYDFIPTVLDRSVVDSWYKSN
DEESFAMSRMLIREEGLLCGGSSGTAMAAAVHVAKELKEGQRCVVILPDSIRNYMSKFLS
DKWMCEKGFLSQEDLVVNRSWWWNLTLQELRLSAPLTVLPLVSIKKTIQILKEKGFDQAP
VVDEAGQILGMVTLGNMLSSVLAGKARPSDPISTVLYKQFKQVRLTDNLGKLSRILETDH
FALVVHEQIQYMNNGSPKMRQMVFGVVTAIDLLNYVATRERRERSMSECSLSEEQ
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagttccatctagttcagagtcagttgggactggtcccatctgcccacatgct
gacaaattcctcacaaaagctgcaaatggagaggcaaaactgaaatctgatgacgttttg
aacggaaaggctggacagaagttaattgtgaatagcacagaccatgtgaatgaaacaaat
ggtaaccacattgagaacggatcagaagccaacatggagaggaaatggattcgaccagat
ttgcccagcagatgcacctggaagcttgatgacccaaatacagagtcgccgcacaaccac
tttcaacgaacaaagactcccaatatcctccccaacattttaagcaagattggagagacc
ccgctagtccgcatgaacaagattcctaaaacttttgacctcaagtgtgagcttttggct
aaatgtgagttcttcaatgccggtggcagtgtgaaggaccgaatcagtctgcgtatggta
gaggatgctgaaaaagatggcatccttaaacctggagacaccattattgagcccacatca
ggaaacacagggattggtcttgccctggcagcagcagtcaaaggttatcgctgcatcatt
gtcatgcctgagaagatgagcatggaaaaggtggatgtgctccgcgctctcggtgctgag
attgttcgcacacctacttcagcccggtttgactctcctgagtctcatgttggggtggct
tggcgtttgaagaatgagattcctaatgctcacattctagaccagtaccgcaatcccagc
aaccccctggcccactatgacaccactgcagaggagattctggagcagtgtgacggtaaa
atagacatgctggtggccggagctggcactggtggcaccattactggcatcgctcgcaaa
ctgaaggagaaatgccctaatatcaagatagttggagtggatcctgagggctctatcctt
gctgagccggaggagctgaataagactgataagactcaatatgaggttgagggcatcgga
tatgacttcatccccactgttctggacagatctgtggtggatagttggtacaagtccaat
gatgaagagtcctttgccatgtctcgtatgctcatcagagaggagggccttctatgcggt
ggtagttcaggcacagccatggctgcagcagtgcatgtagccaaagagctgaaggaaggc
cagcgctgtgtggtgatcctccccgactcaatccgcaactacatgtctaaatttcttagc
gacaagtggatgtgtgaaaagggcttcctgagccaggaggatcttgttgtcaacaggtca
tggtggtggaatctgactctacaggagctcaggctctccgcccctctgactgtgctgcct
ttagtgtctattaagaagaccattcagatcctgaaagagaagggttttgaccaagcccct
gtggtggacgaggccgggcagattctgggcatggtcacgttgggaaacatgctctcatcc
gttttggctgggaaggccaggccatctgatcccataagcacagttctctacaaacagttt
aaacaggtgcgcctaactgataacctgggcaagctctcgcgtatccttgagacggaccat
ttcgcccttgttgtgcatgaacagattcaatacatgaacaatggatcccccaagatgagg
cagatggtgtttggggtagtgacggccattgacctgctgaactacgtggccacacgtgag
aggagggaacgctcgatgtctgagtgctcgctgtcagaagagcagtga
DBGET
integrated database retrieval system
