Garra rufa (doctor fish): 141340856
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Entry
141340856 CDS
T11039
Symbol
raph1a
Name
(RefSeq) ras-associated and pleckstrin homology domains-containing protein 1a isoform X1
KO
K23488
Ras-associated and pleckstrin homology domains-containing protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141340856 (raph1a)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
141340856 (raph1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA_2
RA
PH
RBD
PH_11
PI3K_rbd
Motif
Other DBs
NCBI-GeneID:
141340856
NCBI-ProteinID:
XP_073702048
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Position
8:complement(5900874..5998404)
Genome browser
AA seq
1358 aa
AA seq
DB search
MEQFSDDELDHAAEEDSDKDDQDLDKMFGAWLGELDKLTKSLDDGRPEKVQKAPLRQETN
MANMAYRFSIYNINEALNQGDAVDLDALMADLCSIEQELSTIGKPSSASSRLGLTGDTKV
RQKPPAGRSHSTKHTGSSSGGASSSGGSTSSSTRASPASTVRVSSSNSRPPLASNFSLDD
ITAQLEKASLSMDEAARQSTTSFGSTVLAPYSSSTVRRPTSHHHHHRRTGSVGTVTEHEV
RSFVHSSRSSINSASASSMDSLDIEKPKSDQDGLQDGQEQPSSEHSYLDRETSLILQSIA
GKPSHLLTKEEQAAKQKAEKIRVALEKIKEAQVKKLVIRVHLSDESSKTMMVDERQTVRQ
VLDNLLDKSHCGYSLDWSLVEIISELQMERIFEDHENLVENLLNWTRDSTNRLMFIERIE
KYALFKNPQNYLLGRKETCEMADRNKEALLEECFCGSSISVPEMEGVLWLKDDGKKSWKK
RYFLLRASGLYYVPKGKAKASRDLVCFLQLDHVNIYLGQDYRSKYKAPTDYCMVLKHPQI
QKKSQYIKYLCCDDVRTLHQWVNGIRIAKYGKQLYLNYQEAMKRTEAAHDWSSLSSSSIK
SGSSSSSLPESQSNHSSQSDSGVSETTSSGHVRSQSVVSSIFSEAWKRGNQTDEPKMRMD
GPPAQPARASYPLQLPPLPQSFQSRSSYSGVSPVSPSSPPSPPPPPPPPPPLPNPTHHST
PVMFTKYSTLARLQNISQAPSHYKQTPLLAAQQQLMPPTPPPQSLKPVMNNMADAASSPP
PPPPPPPPPEMPVPGSAMAVLKHAPLSPHYAPPPPPEEDQLPPHLHSNGNLPPPPPPEQL
KYSPPLSTNGLQQFLAQKFPNMSYDFSPVQQDEEPPPPPPVCFSPPPQQSGPLAPPKTFT
GGFPPQTAPKPSHGISPVSPVPPSLSPTPSATMKKQQSLSTGHSPNQPPPTLPKQYSLSS
KSPSVSAPISPTQSLVKQIVNQFPDTPDGSKGPLSPPVVKTKPKWQPGGQAQPQSPEFPP
PPPESALDFPPPPAPSPPPAPQPSGKMGSPIKKSPSTSSNSSTGSGGKKPPPTPQRNSSM
KSASSVEYQESKKVEDLVSMFAQTSQAQPSSFSTPSSTTGSPSKDSTGPRAAPKPGKINL
ATLPLALQGKQGQYHLSSVDFPSPPPECDFPPPPPDSELLPPPPLPSELHTGAPKVAVVN
PQPQHSSSSTSSWKQSSLKKMAPPTMHRRSSGPPEPLVLSPPPQQMPLSSFNSQIPPTSP
KASMPIQPNFLEDLNRTLKRKSMTRHGSLTSSRISAKLEPVTTMDDMALPPPPPELLLGQ
QKKGGYMSANISGYATLRRGPPPAPPKRDQNTKLTSEW
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttttcagatgacgaactagatcacgctgcagaagaggatagtgataaagac
gaccaggacctggacaaaatgtttggagcttggctgggagagctggacaaactgacaaag
agtctagatgacgggagaccagagaaggtgcagaaagcccctctcagacaagagacaaac
atggccaacatggcctaccgcttctccatttataacatcaacgaggctctgaaccagggt
gacgcagtggatctggatgctctgatggcagacctctgctccatcgagcaggagctcagc
accatcggtaagcctagcagcgcttcctctcgcctcggcctgacaggggacaccaaagtc
cgtcagaagcccccggccggccgcagtcacagcaccaagcacacaggcagcagcagcgga
ggggcgagtagcagtggcggcagcaccagcagcagtacccgcgcctctcccgcgtccacc
gtcagggtgagcagctccaacagcagacccccgctggcatcaaacttttctctagatgac
atcacagcccagctggaaaaagcctccctgagtatggatgaagcagccaggcagagcacc
acatctttcggctctacagtcttagcaccttactcttcctccaccgtgcggcggccgacc
tcccatcatcatcatcatcgcaggacagggtcggtgggtacggtcaccgagcatgaggtg
cggtcctttgtccattcctctcgctctagcattaactcggcctctgcgtccagcatggac
tcgctagacatcgaaaaacccaagtctgatcaggacgggttgcaggatggacaggagcag
ccgagttcagagcactcgtatttggacagggagacctctctcattctgcaaagcattgca
ggaaagccctctcacttgctgaccaaggaggaacaagctgccaaacaaaaagctgagaag
atccgagtagccctggagaagataaaggaagcgcaggttaaaaagttggtaatccgagtg
cacctatcagatgaaagctcaaagactatgatggtggatgagagacagacggtgcgccaa
gtgctggacaacctgctggacaaatcccactgcggttatagcctggactggtctctggtg
gaaatcatcagtgaactccagatggagagaatcttcgaggatcatgagaacctggttgag
aacttgctgaactggaccagggacagcaccaacagactgatgttcatcgaacgcattgag
aaatacgcacttttcaagaaccctcagaactatttgctggggcgtaaggaaacgtgtgag
atggctgacagaaataaagaggctctgttggaggagtgtttctgtggaagctctatcagt
gtgcctgagatggaaggggtgctctggctcaaagacgacggcaagaaatcctggaagaag
cgctactttctgttacgagcatcggggctatattatgtgccaaagggtaaagccaaggcc
tctagagacctggtttgcttcctgcagctggatcatgttaacatatacttgggacaggac
taccgcagcaagtataaagccccaactgactactgcatggtcctgaagcacccacagatt
cagaagaaatcacagtacatcaagtacctgtgctgtgatgatgtcagaacgctgcatcag
tgggtcaacggaatacgcattgccaagtatgggaagcagctgtatttaaactaccaggaa
gctatgaaacgcacggaggctgctcatgactggtcctccctgtccagctccagtatcaag
tctggttccagctcctccagtctgccagagtctcaatccaaccactccagccaatcagat
agtggtgtgtcagagactacatcctctggtcatgtgcgctctcagagtgtggtcagctcc
atcttctctgaggcctggaagagaggcaatcagacagatgaacccaagatgagaatggat
ggcccaccagcacagcctgctagagcctcttaccctctacagcttcccccactgccccag
tctttccagtctcgtagcagctacagtggtgtgtccccagtgtccccttcctcgccccca
tctccaccaccacctcctccaccacctccgcctctccccaaccccacgcaccactccaca
ccggttatgttcactaaatacagcacccttgcaaggttgcaaaacatctcccaggctccg
agtcattacaaacagacccccttattggcagcacagcagcagcttatgccccctacaccg
cctccacaaagtctcaaacctgtaatgaataacatggcagatgctgccagcagtccccct
ccacccccaccaccaccgcctcctccagagatgccagtgccagggtcagccatggcggtg
ttaaaacacgcccctcttagccctcattatgctcctcctccacctccagaggaagatcag
ctgccacctcacctacacagtaatggcaacttgcctccaccaccacccccagaacagtta
aaatactcacctcccctcagcaccaatgggctccagcagttcttagctcagaagtttcct
aatatgtcctatgacttctcacctgtccaacaagatgaagagcctccaccacctcccccg
gtgtgtttctctccaccgcctcagcagtcaggtccactcgccccgcctaaaacattcacc
ggtgggtttccaccccaaacggctccaaaaccctcccacgggatttcccccgtttcccct
gtgccaccttctttgtctccaactccttcggccaccatgaagaaacagcaaagcctctcc
actggtcacagtcctaatcaacctccacctacccttcccaagcagtatagcctttcttcc
aaatctccatcagtttctgcccccatctctccaacacaatcgctcgtaaagcagattgta
aatcagttccctgacacccctgatggatccaaaggtcccttatctcctcctgtggtaaag
accaaaccaaaatggcaaccaggaggacaggctcaaccacagtctcctgaatttcctcca
ccgccaccagagagtgcccttgatttccctccacctcctgctccaagtcctcctcctgcc
ccacagccttctggcaagatgggatcaccgatcaagaagtccccatcgacgtcgtctaat
tcttcaactggttcaggagggaagaagccccctccaaccccacagcgcaactccagcatg
aagtccgcctcctccgtggagtaccaggagtcaaagaaagtggaggatctggtcagcatg
tttgcccaaaccagtcaagcccaacccagctccttttcaacaccatcctctacgacagga
tccccttccaaggactccacaggacctcgtgcagcaccaaaaccaggcaagatcaactta
gctactctgcctctggctctccaggggaagcaaggccaatatcacctatccagcgtggac
ttcccctcccctcctcctgagtgtgactttccccctccgccgccagactcagaactcctg
cctcctccacctctcccttcagaactgcacaccggggctcccaaagtggccgtggtgaac
cctcaaccccaacactcctccagctccacatcctcatggaagcaaagctccttgaagaaa
atggcccctccgactatgcaccgccgcagcagtggcccacccgagccgcttgtcctttct
ccgcctcctcaacagatgcctctgtcctcttttaactctcagatcccaccaacttccccc
aaggccagtatgccgatccagcccaacttcttggaagacctcaacagaactcttaaaagg
aagtccatgactcgacatggctccctcacgtcctccagaatctcggccaagctggagcca
gtaaccaccatggacgatatggcccttccgccccctccgccagagctgctgctgggccag
cagaaaaagggtggatacatgagcgccaacatctcaggctatgcaacgttacggcggggg
cctccgccggctccacccaaacgggaccaaaacactaaactgacaagcgagtggtag
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