KEGG   Garra rufa (doctor fish): 141342672
Entry
141342672         CDS       T11039                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DO alpha chain-like
  KO
K06752  MHC class II antigen
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04145  Phagosome
grf04514  Cell adhesion molecules
grf04672  Intestinal immune network for IgA production
grf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    141342672
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    141342672
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    141342672
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    141342672
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:grf04147]
    141342672
Exosome [BR:grf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   141342672
  Exosomal proteins of epithelial cells
   141342672
  Exosomal proteins of breast milk
   141342672
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 C2-set_2 ig I-set Podoplanin Herpes_gp2
Other DBs
NCBI-GeneID: 141342672
NCBI-ProteinID: XP_073703272
LinkDB
Position
9:complement(6216034..6220724)
AA seq 220 aa
MRQLTYCHIEMMDAGFELDFDGEELWHFDYLNNTPKQRLPEFAGDWTLDRNLPSKANLSI
GTCFYNIPKCIAGEKNPPESIVPPSTQLYAKNDVKLGVKNTLICSVSNFHPPPVIISWTR
NGEPVSEQDVSQTQYYSNPDFSFRIFSYLNFLPERGDIYTCSVRHRGLEQDITRFWEVDV
PEDSQEVETAVLVIGILVGFLGFVVGIIIIVTSKMDLRAV
NT seq 663 nt   +upstreamnt  +downstreamnt
atgcgtcagttgacgtactgccatatagagatgatggacgctggttttgagctggatttt
gacggtgaggagctctggcactttgactacttaaataacaccccaaagcagcgtttgccg
gagtttgcaggcgactggaccctcgaccgcaatctgccttctaaagcgaatttgtccatc
ggcacctgcttctacaatattcccaagtgcatcgcaggagaaaaaaatcctcccgaatcc
attgttcctccgtccacacagctgtacgccaagaacgacgtgaagctcggtgttaaaaac
accctcatctgctcagtgagcaactttcacccgccgccggtgattatctcctggacgagg
aacggagagccggtgagcgagcaggacgtcagccagacgcagtattactcaaacccagac
ttcagctttcgcatcttctcctacctgaacttccttcctgagcgcggagacatttacacc
tgcagcgtcagacacagaggactggagcaggacatcaccaggttttgggaggtggatgtg
ccggaagactctcaggaggttgagacggcggtgcttgtgatcggaattctggtgggattt
ttgggatttgtggtgggaatcattattatcgtaacgagcaagatggatctgcgggctgta
tga

DBGET integrated database retrieval system